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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA1227535" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 8 ✖

bioproject 1

  • PRJNA1227535 · 8 ✖

analysis 1

  • diamond · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10539234 10539234 PRJNA1227535_P_NODE_25969_length_248_cov_0.891429_g25845_i0 PRJNA1227535 25969 248 0.891429 2.21074392 Halodesulfurarchaeum sp. 1980530 Archaea Archaea 148 2.72e-39   NR MDZ7849945.1 1980530 g25845 i0 92.7 1.98387096774194 82 6 99.2 0 247 2 40 121 MDZ7849945.1 ATP-dependent DNA helicase [Halodesulfurarchaeum sp.] diamond 492 148 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halodesulfurarchaeum Halodesulfurarchaeum sp.
27262489 27262489 PRJNA1227535_P_NODE_19983_length_258_cov_2.924324_g19859_i0 PRJNA1227535 19983 258 2.924324 7.54475592 Natrinema sp. DC36 2878680 Archaea Archaea 45.8 0.0028   NR WP_226041190.1 2878680 g19859 i0 38.2 1.03488372093023 89 48 100 4 258 1 121 205 WP_226041190.1 hypothetical protein [Natrinema sp. DC36] diamond 267 45.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrinema Natrinema sp. DC36
27628808 27628808 PRJNA1227535_P_NODE_33384_length_227_cov_2.025974_g33260_i0 PRJNA1227535 33384 227 2.025974 4.59896098 Halonotius 869896 Archaea Archaea 128 4.42e-33   NR WP_120101492.1 2216978 g33260 i0 90.7 2.97356828193833 75 7 99.1 0 226 2 268 342 WP_120101492.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase [Halonotius aquaticus] diamond 675 129 0.992248062015504 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halonotius Halonotius aquaticus
28936026 28936026 PRJNA1227535_P_NODE_22228_length_253_cov_0.866667_g22104_i0 PRJNA1227535 22228 253 0.866667 2.19266751 Halodesulfurarchaeum sp. HSR-GB 3074077 Archaea Archaea 76.6 4.86e-14   NR WP_310553072.1 3074077 g22104 i0 66.7 0.640316205533597 54 18 64 0 163 2 1 54 WP_310553072.1 COG1361 S-layer family protein [Halodesulfurarchaeum sp. HSR-GB] diamond 162 76.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halodesulfurarchaeum Halodesulfurarchaeum sp. HSR-GB
28999466 28999466 PRJNA1227535_P_NODE_18708_length_263_cov_1.231579_g18584_i0 PRJNA1227535 18708 263 1.231579 3.23905277 Methanosarcinales archaeon 2250255 Archaea Archaea 57.8 2.09e-7   NR HUV84177.1 2250255 g18584 i0 39.5 0.980988593155893 86 50 98.1 1 259 2 132 215 HUV84177.1 N4-gp56 family major capsid protein [Methanosarcinales archaeon] diamond 258 57.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
29062395 29062395 PRJNA1227535_P_NODE_12228_length_285_cov_1.136792_g12105_i0 PRJNA1227535 12228 285 1.136792 3.2398572 Methanobacterium sp. 2164 Archaea Archaea 127 6.059999999999999e-35   NR TMS40652.1 2164 g12105 i0 81.3 1.57894736842105 75 14 78.9 0 59 283 1 75 TMS40652.1 MAG: hypothetical protein FGO69_10600 [Methanobacterium sp.] diamond 450 127 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
31196942 31196942 PRJNA1227535_P_NODE_30675_length_242_cov_0.923077_g30551_i0 PRJNA1227535 30675 242 0.923077 2.23384634 Halobacteriales 2235 Archaea Archaea 86.3 3.3e-18   NR SEP16067.1 1367881 g30551 i0 51.3 7.71074380165289 78 38 96.7 0 1 234 123 200 SEP16067.1 exodeoxyribonuclease VII large subunit [Halorientalis persicus] diamond 1866 87 0.991954022988506 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halorientalis Halorientalis persicus
31621298 31621298 PRJNA1227535_P_NODE_22716_length_252_cov_0.871508_g22592_i0 PRJNA1227535 22716 252 0.871508 2.19620016 Methanobacterium sp. 2164 Archaea Archaea 75.1 1.32e-15   NR HEY0196787.1 2164 g22592 i0 70.5 0.928571428571429 78 23 92.9 0 251 18 5 82 HEY0196787.1 hypothetical protein [Methanobacterium sp.] diamond 234 75.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;