RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

32 rows where analysis = "diamond", bioproject = "PRJNA1227535" and tax_clade = "Bacteria candidate phyla"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 32 ✖

bioproject 1

  • PRJNA1227535 · 32 ✖

analysis 1

  • diamond · 32 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2886195 2886195 PRJNA1227535_P_NODE_21603_length_253_cov_2.550000_g21479_i0 PRJNA1227535 21603 253 2.55 6.4515 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 164 5.329999999999998e-47   NR MBY0273696.1 2838779 g21479 i0 94 0.99604743083004 84 5 99.6 0 252 1 175 258 MBY0273696.1 LL-diaminopimelate aminotransferase [Candidatus Binatia bacterium] diamond 252 164 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
7988949 7988949 PRJNA1227535_P_NODE_6947_length_312_cov_2.983264_g6824_i0 PRJNA1227535 6947 312 2.983264 9.30778368 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 102 5.74e-23   NR MFN8601089.1 2838779 g6824 i0 100 0.471153846153846 49 0 47.1 0 164 310 84 132 MFN8601089.1 TolC family protein [Candidatus Binatia bacterium] diamond 147 102 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
9263225 9263225 PRJNA1227535_P_NODE_14248_length_277_cov_3.803922_g14125_i0 PRJNA1227535 14248 277 3.803922 10.53686394 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 103 1.11e-24   NR HEY7540561.1 2072417 g14125 i0 56.4 2.04693140794224 94 39 99.6 1 2 277 44 137 HEY7540561.1 SDR family oxidoreductase [Candidatus Methylomirabilota bacterium] diamond 567 103 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
9975088 9975088 PRJNA1227535_P_NODE_25688_length_248_cov_0.891429_g25564_i0 PRJNA1227535 25688 248 0.891429 2.21074392 Candidatus Saccharibacteria bacterium 32-5 1970481 Bacteria Bacteria 167 1.21e-46   NR OYX53261.1 1970481 g25564 i0 100 0.991935483870968 82 0 99.2 0 248 3 161 242 OYX53261.1 MAG: molecular chaperone DnaK [Candidatus Saccharibacteria bacterium 32-50-13] diamond 246 167 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-50-13
14364320 14364320 PRJNA1227535_P_NODE_22872_length_252_cov_0.871508_g22748_i0 PRJNA1227535 22872 252 0.871508 2.19620016 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 68.2 4.55e-11   NR HEX7880535.1 2212470 g22748 i0 57.7 2.10714285714286 52 22 61.9 0 247 92 706 757 HEX7880535.1 PAS domain S-box protein [Candidatus Eiseniibacteriota bacterium] diamond 531 68.2 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
26788055 26788055 PRJNA1227535_P_NODE_28741_length_244_cov_1.824561_g28617_i0 PRJNA1227535 28741 244 1.824561 4.45192884 Candidatus Saccharibacteria bacterium 32-49-1 1970478 Bacteria Bacteria 146 3.209999999999999e-43   NR OYW84792.1 1970478 g28617 i0 97.3 0.909836065573771 74 2 91 0 242 21 57 130 OYW84792.1 MAG: hypothetical protein B7Z17_03480 [Candidatus Saccharibacteria bacterium 32-49-10] diamond 222 146 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-49-10
27072712 27072712 PRJNA1227535_P_NODE_9302_length_296_cov_3.062780_g9179_i0 PRJNA1227535 9302 296 3.06278 9.0658288 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 87.4 1.44e-19   NR MCA9341927.1 2026720 g9179 i0 87.2 1.95608108108108 47 6 47.6 0 12 152 1 47 MCA9341927.1 ribonuclease HI [Candidatus Saccharibacteria bacterium] diamond 579 87.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27389014 27389014 PRJNA1227535_P_NODE_24703_length_249_cov_1.772727_g24579_i0 PRJNA1227535 24703 249 1.772727 4.41409023 Patescibacteria group bacterium 2052139 Bacteria Bacteria 103 5.0099999999999994e-24   NR MFA5186963.1 2052139 g24579 i0 63 0.975903614457831 81 30 97.6 0 246 4 152 232 MFA5186963.1 DUF2800 domain-containing protein [Patescibacteria group bacterium] diamond 243 103 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27452203 27452203 PRJNA1227535_P_NODE_24383_length_250_cov_0.881356_g24259_i0 PRJNA1227535 24383 250 0.881356 2.20339 Minisyncoccota bacterium 2053589 Bacteria Bacteria 127 3.68e-32   NR MFM7089071.1 2053589 g24259 i0 69.1 0.972 81 25 97.2 0 1 243 193 273 MFM7089071.1 GspE/PulE family protein [Candidatus Paceibacterota bacterium] diamond 243 127 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27515145 27515145 PRJNA1227535_P_NODE_33363_length_227_cov_2.025974_g33239_i0 PRJNA1227535 33363 227 2.025974 4.59896098 Candidatus Saccharimonas sp. 1917697 Bacteria Bacteria 111 2.33e-26   NR MEO5949297.1 1917697 g33239 i0 65.8 0.964757709251101 73 25 96.5 0 227 9 616 688 MEO5949297.1 DEAD/DEAH box helicase [Candidatus Saccharimonas sp.] diamond 219 111 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
27704935 27704935 PRJNA1227535_P_NODE_29964_length_243_cov_0.917647_g29840_i0 PRJNA1227535 29964 243 0.917647 2.22988221 Candidatus Saccharimonas sp. 1917697 Bacteria Bacteria 140 1.13e-39   NR RKW00259.1 1917697 g29840 i0 97.4 1.90123456790123 77 2 95.1 0 2 232 141 217 RKW00259.1 MAG: hypothetical protein D8B38_06100 [Candidatus Saccharimonas sp.] diamond 462 140 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
28051851 28051851 PRJNA1227535_P_NODE_6185_length_312_cov_3.648536_g6062_i0 PRJNA1227535 6185 312 3.648536 11.38343232 Candidatus Saccharibacteria bacterium 32-5 1970481 Bacteria Bacteria 166 1.47e-45   NR OYX53448.1 1970481 g6062 i0 64.9 1.48076923076923 154 4 100 1 312 1 313 466 OYX53448.1 MAG: polyribonucleotide nucleotidyltransferase [Candidatus Saccharibacteria bacterium 32-50-13] diamond 462 166 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-50-13
28114912 28114912 PRJNA1227535_P_NODE_11285_length_288_cov_1.409302_g11162_i0 PRJNA1227535 11285 288 1.409302 4.05878976 Minisyncoccota bacterium 2053589 Bacteria Bacteria 185 4.3299999999999996e-52   NR MEX0918218.1 2053589 g11162 i0 95.8 9 96 4 100 0 1 288 403 498 MEX0918218.1 excinuclease ABC subunit UvrA [Candidatus Paceibacterota bacterium] diamond 2592 185 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28114918 28114918 PRJNA1227535_P_NODE_21665_length_253_cov_2.033333_g21541_i0 PRJNA1227535 21665 253 2.033333 5.14433249 Parcubacteria group bacterium ADurb.Bin216 1852939 Bacteria Bacteria 52.8 1.29e-5   NR OQB07316.1 1852939 g21541 i0 82.1 0.66403162055336 28 5 33.2 0 253 170 1559 1586 OQB07316.1 MAG: hypothetical protein BWY21_01681 [Parcubacteria group bacterium ADurb.Bin216] diamond 168 52.8 1 Bacteria Bacteria candidate phyla             Parcubacteria group bacterium ADurb.Bin216
28209584 28209584 PRJNA1227535_P_NODE_31026_length_242_cov_0.923077_g30902_i0 PRJNA1227535 31026 242 0.923077 2.23384634 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 87 9.22e-18   NR MDB5168151.1 2026720 g30902 i0 48.7 0.966942148760331 78 36 96.7 1 3 236 429 502 MDB5168151.1 chromosome condensation regulator [Candidatus Saccharibacteria bacterium] diamond 234 87 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28304435 28304435 PRJNA1227535_P_NODE_19706_length_259_cov_2.419355_g19582_i0 PRJNA1227535 19706 259 2.419355 6.26612945 Patescibacteria group bacterium 2052139 Bacteria Bacteria 99 6.23e-22   NR MDE2099846.1 2052139 g19582 i0 56 0.972972972972973 84 36 96.1 1 2 250 14 97 MDE2099846.1 DNA topoisomerase III [Patescibacteria group bacterium] diamond 252 99 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28430897 28430897 PRJNA1227535_P_NODE_7866_length_312_cov_2.535565_g7743_i0 PRJNA1227535 7866 312 2.535565 7.9109628 Candidatus Saccharibacteria bacterium 32-5 1970481 Bacteria Bacteria 111 2.9800000000000003e-27   NR OYX54051.1 1970481 g7743 i0 100 3.125 50 0 48.1 0 150 1 169 218 OYX54051.1 MAG: transketolase [Candidatus Saccharibacteria bacterium 32-50-13] diamond 975 111 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-50-13
28765142 28765142 PRJNA1227535_P_NODE_12207_length_285_cov_1.231132_g12084_i0 PRJNA1227535 12207 285 1.231132 3.5087262 Candidatus Mycosynbacter 2831665 Bacteria Bacteria 122 2.9999999999999998e-33   NR HCH34217.1 2026720 g12084 i0 74.4 1.8 86 22 90.5 0 25 282 52 137 HCH34217.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 513 122 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29030902 29030902 PRJNA1227535_P_NODE_18788_length_262_cov_2.465608_g18664_i0 PRJNA1227535 18788 262 2.465608 6.45989296 Minisyncoccota bacterium 2053589 Bacteria Bacteria 110 1.0400000000000002e-27   NR HEX8591360.1 2053589 g18664 i0 68.2 0.973282442748092 85 27 97.3 0 3 257 35 119 HEX8591360.1 CorA family divalent cation transporter [Candidatus Paceibacterota bacterium] diamond 255 110 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29157171 29157171 PRJNA1227535_P_NODE_32909_length_228_cov_3.864516_g32785_i0 PRJNA1227535 32909 228 3.864516 8.81109648 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 60.8 3.02e-10   NR HMS92870.1 2026720 g32785 i0 56.9 0.855263157894737 65 28 85.5 0 33 227 1 65 HMS92870.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 195 60.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29314868 29314868 PRJNA1227535_P_NODE_14649_length_276_cov_1.931034_g14526_i0 PRJNA1227535 14649 276 1.931034 5.32965384 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 41.6 0.0431   NR MBP1779627.1 2072417 g14526 i0 41.7 0.652173913043478 60 30 62 3 32 202 55 112 MBP1779627.1 transporter [Candidatus Methylomirabilota bacterium] diamond 180 41.6 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
29883406 29883406 PRJNA1227535_P_NODE_6851_length_312_cov_3.033473_g6728_i0 PRJNA1227535 6851 312 3.033473 9.46443576 Candidatus Saccharibacteria bacterium 32-5 1970481 Bacteria Bacteria 99 1.32e-21   NR OYX53336.1 1970481 g6728 i0 100 0.480769230769231 50 0 48.1 0 2 151 23 72 OYX53336.1 MAG: murein biosynthesis integral membrane protein MurJ [Candidatus Saccharibacteria bacterium 32-50-13] diamond 150 99 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-50-13
29977928 29977928 PRJNA1227535_P_NODE_12371_length_284_cov_1.796209_g12248_i0 PRJNA1227535 12371 284 1.796209 5.10123356 Candidatus Kerfeldbacteria bacterium 2053565 Bacteria Bacteria 103 2.2799999999999994e-23   NR MBI3956752.1 2053565 g12248 i0 59.6 0.992957746478873 94 37 98.2 1 280 2 152 245 MBI3956752.1 AAA family ATPase [Candidatus Kerfeldbacteria bacterium] diamond 282 103 1 Bacteria Bacteria candidate phyla   Candidatus Kerfeldiibacteriota         Candidatus Kerfeldbacteria bacterium
30326054 30326054 PRJNA1227535_P_NODE_16072_length_271_cov_2.343434_g15949_i0 PRJNA1227535 16072 271 2.343434 6.35070614 Candidatus Saccharibacteria bacterium 32-5 1970481 Bacteria Bacteria 184 1.39e-57   NR OYX53060.1 1970481 g15949 i0 100 0.985239852398524 89 0 98.5 0 2 268 70 158 OYX53060.1 MAG: hypothetical protein B7Y92_04150 [Candidatus Saccharibacteria bacterium 32-50-13] diamond 267 184 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-50-13
30609717 30609717 PRJNA1227535_P_NODE_12213_length_285_cov_1.198113_g12090_i0 PRJNA1227535 12213 285 1.198113 3.41462205 Candidatus Nanosynsacchari sp. TM7_ANC_38.39_G1_1 1986206 Bacteria Bacteria 152 1.87e-44   NR WP_129693450.1 1986206 g12090 i0 98.6 0.747368421052632 71 1 74.7 0 2 214 132 202 WP_129693450.1 CHAP domain-containing protein [Candidatus Nanosynsacchari sp. TM7_ANC_38.39_G1_1] diamond 213 152 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Nanosynsacchari Candidatus Nanosynsacchari sp. TM7_ANC_38.39_G1_1
30831021 30831021 PRJNA1227535_P_NODE_32314_length_233_cov_2.056250_g32190_i0 PRJNA1227535 32314 233 2.05625 4.7910625 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 109 2.0900000000000003e-27   NR MCB9819054.1 2052152 g32190 i0 77.6 1.91845493562232 76 17 97.9 0 229 2 53 128 MCB9819054.1 segregation/condensation protein A [Candidatus Nomurabacteria bacterium] diamond 447 109 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
30926051 30926051 PRJNA1227535_P_NODE_6934_length_312_cov_2.987448_g6811_i0 PRJNA1227535 6934 312 2.987448 9.32083776 TM7 phylum sp. oral taxon 349 713051 Bacteria Bacteria 59.3 1.28e-7   NR TWP24595.1 713051 g6811 i0 57.1 0.471153846153846 49 21 47.1 0 5 151 820 868 TWP24595.1 hypothetical protein EUA66_00725 [TM7 phylum sp. oral taxon 349] diamond 147 59.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         TM7 phylum sp. oral taxon 349
31209693 31209693 PRJNA1227535_P_NODE_14215_length_278_cov_1.214634_g14092_i0 PRJNA1227535 14215 278 1.214634 3.37668252 Candidatus Babeliales bacterium 2803731 Bacteria Bacteria 127 2.13e-32   NR HTL79420.1 2803731 g14092 i0 100 0.658273381294964 61 0 65.8 0 185 3 1 61 HTL79420.1 MFS transporter [Candidatus Babeliales bacterium] diamond 183 127 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales     Candidatus Babeliales bacterium
31526616 31526616 PRJNA1227535_P_NODE_33436_length_225_cov_4.467105_g33312_i0 PRJNA1227535 33436 225 4.467105 10.05098625 Candidatus Saccharibacteria bacterium 32-5 1970480 Bacteria Bacteria 142 1.9999999999999997e-37   NR OYX35436.1 1970480 g33312 i0 98.6 0.986666666666667 74 1 98.7 0 223 2 491 564 OYX35436.1 MAG: hypothetical protein B7Z00_05100 [Candidatus Saccharibacteria bacterium 32-50-10] diamond 222 142 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-50-10
32539106 32539106 PRJNA1227535_P_NODE_32419_length_232_cov_2.496855_g32295_i0 PRJNA1227535 32419 232 2.496855 5.7927036 Patescibacteria group bacterium 2052139 Bacteria Bacteria 44.7 0.00662   NR MBU0546883.1 2052139 g32295 i0 31.3 0.827586206896552 64 44 82.8 0 41 232 123 186 MBU0546883.1 DNA polymerase III subunit beta [Patescibacteria group bacterium] diamond 192 44.7 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
32602004 32602004 PRJNA1227535_P_NODE_23540_length_251_cov_0.876404_g23416_i0 PRJNA1227535 23540 251 0.876404 2.19977404 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 164 2.68e-49   NR MBH1980202.1 2026720 g23416 i0 94 1.9840637450199201 83 5 99.2 0 1 249 96 178 MBH1980202.1 cytochrome c oxidase subunit 3 [Candidatus Saccharibacteria bacterium] diamond 498 164 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32651872 32651872 PRJNA1227535_P_NODE_18420_length_264_cov_0.942408_g18296_i0 PRJNA1227535 18420 264 0.942408 2.48795712 Bacteria 2 Bacteria Bacteria 44.3 0.0133   NR OIO29128.1 1805280 g18296 i0 46.3 2.43181818181818 54 28 60.2 1 214 56 428 481 OIO29128.1 MAG: AAA family ATPase, partial [Candidatus Nomurabacteria bacterium CG1_02_31_12] diamond 642 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium CG1_02_31_12

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;