RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1226487" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1226487 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28336019 28336019 PRJNA1226487_P_NODE_32986_length_308_cov_1.089362_g32884_i0 PRJNA1226487 32986 308 1.089362 3.35523496 Hydra vulgaris 6087 Cnidaria other_Eukaryota 89 2.29e-19   NR XP_004209547.2 6087 g32884 i0 51.8 0.827922077922078 85 41 82.8 0 51 305 1 85 XP_004209547.2 uncharacterized protein LOC101239388 [Hydra vulgaris] diamond 255 89 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
32349276 32349276 PRJNA1226487_P_NODE_82919_length_196_cov_4.959350_g82817_i0 PRJNA1226487 82919 196 4.95935 9.720326 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 51.2 2.09e-5   NR KXJ24236.1 2652724 g82817 i0 51.2 0.658163265306122 43 21 65.8 0 8 136 1140 1182 KXJ24236.1 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Exaiptasia diaphana] diamond 129 51.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;