RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA1218818" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA1218818 · 8 ✖

analysis 1

  • diamond · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27325613 27325613 PRJNA1218818_P_NODE_24643_length_250_cov_0.870056_g24576_i0 PRJNA1218818 24643 250 0.870056 2.17514 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 80.5 2.1e-15   NR KRX10689.1 266149 g24576 i0 50.6 1.02 85 35 99.6 2 2 250 185 264 KRX10689.1 Protein kinase-like domain [Pseudocohnilembus persalinus] diamond 255 80.5 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
27893876 27893876 PRJNA1218818_P_NODE_26685_length_246_cov_0.861272_g26618_i0 PRJNA1218818 26685 246 0.861272 2.11872912 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 59.7 3.96e-8   NR XP_001022292.2 312017 g26618 i0 41 1.9390243902439 83 47 98.8 1 2 244 217 299 XP_001022292.2 peptidase M16 inactive domain protein [Tetrahymena thermophila SB210] diamond 477 59.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
28335983 28335983 PRJNA1218818_P_NODE_25926_length_247_cov_0.885057_g25859_i0 PRJNA1218818 25926 247 0.885057 2.18609079 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 64.7 7.23e-10   NR XP_004036434.1 5932 g25859 i0 56.4 1.57894736842105 55 24 66.8 0 169 5 522 576 XP_004036434.1 ubiquitin, putative [Ichthyophthirius multifiliis] diamond 390 64.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
28809291 28809291 PRJNA1218818_P_NODE_28548_length_242_cov_0.911243_g28481_i0 PRJNA1218818 28548 242 0.911243 2.20520806 Paramecium tetraurelia 5888 SAR_Eukaryotes SAR_Eukaryotes 95.9 5.66e-22   NR XP_001432817.1 5888 g28481 i0 52.5 2.77685950413223 80 36 99.2 1 241 2 33 110 XP_001432817.1 uncharacterized protein GSPATT00034899001 [Paramecium tetraurelia] diamond 672 95.9 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
29377977 29377977 PRJNA1218818_P_NODE_26429_length_246_cov_0.890173_g26362_i0 PRJNA1218818 26429 246 0.890173 2.18982558 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 62 2.81e-10   NR XP_001471039.1 312017 g26362 i0 46.5 0.865853658536585 71 38 86.6 0 219 7 17 87 XP_001471039.1 hypothetical protein TTHERM_00242188 [Tetrahymena thermophila SB210] diamond 213 62 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
29807072 29807072 PRJNA1218818_P_NODE_18971_length_287_cov_1.177570_g18904_i0 PRJNA1218818 18971 287 1.17757 3.3796259 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 118 1.5999999999999999e-31   NR XP_004040150.1 5932 g18904 i0 62.1 6.95121951219512 95 36 99.3 0 3 287 73 167 XP_004040150.1 hypothetical protein IMG5_000740 [Ichthyophthirius multifiliis] diamond 1995 118 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
31969211 31969211 PRJNA1218818_P_NODE_23378_length_255_cov_2.461538_g23311_i0 PRJNA1218818 23378 255 2.461538 6.2769219 Euplotes vannus 5939 SAR_Eukaryotes SAR_Eukaryotes 64.3 4.18e-11   NR AAU88249.1 5939 g23311 i0 51.5 2.8 68 33 80 0 1 204 3 70 AAU88249.1 acidic ribosomal P2 protein, partial [Euplotes vannus] diamond 714 64.3 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes vannus
32273089 32273089 PRJNA1218818_P_NODE_14638_length_323_cov_1.848000_g14571_i0 PRJNA1218818 14638 323 1.848 5.96904 Paramecium 5884 SAR_Eukaryotes SAR_Eukaryotes 90.5 1.35e-20   NR CAD8206115.1 43137 g14571 i0 50 1.96904024767802 106 52 97.5 1 2 316 3 108 CAD8206115.1 unnamed protein product [Paramecium octaurelia] diamond 636 90.5 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium octaurelia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;