RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1218816" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1218816 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27736419 27736419 PRJNA1218816_P_NODE_40604_length_302_cov_2.275109_g40171_i0 PRJNA1218816 40604 302 2.275109 6.87082918 Candidatus Ryanbacteria bacterium RIFCSPLOWO2_ 2518621 Bacteria Bacteria 50.1 1.5e-5   NR OGZ54385.1 1802128 g40171 i0 46.6 1.24172185430464 73 39 72.5 0 11 229 4 76 OGZ54385.1 MAG: hypothetical protein A3H64_02295 [Candidatus Ryanbacteria bacterium RIFCSPLOWO2_02_FULL_45_11c] diamond 375 50.1 1 Bacteria Bacteria candidate phyla   Candidatus Ryaniibacteriota         Candidatus Ryanbacteria bacterium RIFCSPLOWO2_02_FULL_45_11c
28051810 28051810 PRJNA1218816_P_NODE_46105_length_279_cov_1.393204_g45672_i0 PRJNA1218816 46105 279 1.393204 3.88703916 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 155 9.919999999999997e-42   NR RKU29921.1 2026781 g45672 i0 72.8 14.8387096774194 92 25 98.9 0 2 277 588 679 RKU29921.1 MAG: NAD(+) synthase [Candidatus Poribacteria bacterium] diamond 4140 155 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
31400081 31400081 PRJNA1218816_P_NODE_54776_length_250_cov_0.870056_g54343_i0 PRJNA1218816 54776 250 0.870056 2.17514 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 137 1.43e-35   NR MCB9462269.1 2212470 g54343 i0 80.7 1.992 83 16 99.6 0 249 1 63 145 MCB9462269.1 HEAT repeat domain-containing protein [Candidatus Eiseniibacteriota bacterium] diamond 498 137 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;