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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA1215813" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA1215813 · 13 ✖

analysis 1

  • diamond · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2321153 2321153 PRJNA1215813_P_NODE_5322_length_335_cov_2.977099_g5242_i0 PRJNA1215813 5322 335 2.977099 9.97328165 Piroplasmida 5863 SAR_Eukaryotes SAR_Eukaryotes 156 6.41e-46   NR AFJ45055.1 5874 g5242 i0 67.9 14.6955223880597 109 35 97.6 0 328 2 1 109 AFJ45055.1 ribosomal protein S8, partial [Theileria annulata] diamond 4923 157 0.993630573248408 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria annulata
4158801 4158801 PRJNA1215813_P_NODE_5764_length_324_cov_1.243028_g5684_i0 PRJNA1215813 5764 324 1.243028 4.02741072 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 150 1.19e-39   NR XP_013247277.1 5801 g5684 i0 77.7 9.27777777777778 94 21 87 0 2 283 684 777 XP_013247277.1 glycogen phosphorylase family protein, putative [Eimeria acervulina] diamond 3006 150 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
6709515 6709515 PRJNA1215813_P_NODE_10966_length_247_cov_1.344828_g10886_i0 PRJNA1215813 10966 247 1.344828 3.32172516 Plasmodium yoelii 5861 SAR_Eukaryotes SAR_Eukaryotes 89.7 3.53e-19   NR XP_731025.1 5861 g10886 i0 59.7 1.7246963562753 72 29 87.4 0 32 247 148 219 XP_731025.1 uncharacterized protein PY17X_0205700 [Plasmodium yoelii] diamond 426 89.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
7985148 7985148 PRJNA1215813_P_NODE_3127_length_428_cov_1.594366_g3047_i0 PRJNA1215813 3127 428 1.594366 6.82388648 Hepatocystis sp. ex Piliocolobus tephrosceles 2600580 SAR_Eukaryotes SAR_Eukaryotes 206 1.7e-62   NR VWU50564.1 2600580 g3047 i0 71.2 2.94392523364486 139 40 97.4 0 426 10 240 378 VWU50564.1 S-adenosylmethionine synthetase, putative [Hepatocystis sp. ex Piliocolobus tephrosceles] diamond 1260 206 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Hepatocystis Hepatocystis sp. ex Piliocolobus tephrosceles
16908864 16908864 PRJNA1215813_P_NODE_1534_length_599_cov_2.195817_g1457_i0 PRJNA1215813 1534 599 2.195817 13.15294383 Theileria equi strain WA 1537102 SAR_Eukaryotes SAR_Eukaryotes 267 2.4299999999999996e-85   NR XP_004830458.1 1537102 g1457 i0 64.8 5.02838063439065 199 68 99.7 2 598 2 2 198 XP_004830458.1 60S ribosomal protein L3, putative [Theileria equi strain WA] diamond 3012 267 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria equi
20733199 20733199 PRJNA1215813_P_NODE_3677_length_397_cov_1.848765_g3597_i0 PRJNA1215813 3677 397 1.848765 7.33959705 root 1 Root_unresolved Root_unresolved 193 4.3e-59   NR CAL7860562.1 1344799 g3597 i0 71.9 3.83123425692695 128 36 96.7 0 393 10 127 254 CAL7860562.1 unnamed protein product [Sarcocystis calchasi] diamond 1521 193 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi
22008513 22008513 PRJNA1215813_P_NODE_7578_length_285_cov_1.839623_g7498_i0 PRJNA1215813 7578 285 1.839623 5.24292555 Sarcocystis calchasi 1344799 SAR_Eukaryotes SAR_Eukaryotes 104 4.77e-25   NR CAL7859022.1 1344799 g7498 i0 55.2 1.88421052631579 87 37 91.6 2 275 15 10 94 CAL7859022.1 unnamed protein product [Sarcocystis calchasi] diamond 537 104 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi
27198877 27198877 PRJNA1215813_P_NODE_11682_length_245_cov_0.906977_g11602_i0 PRJNA1215813 11682 245 0.906977 2.22209365 Eimeria necatrix 51315 SAR_Eukaryotes SAR_Eukaryotes 95.9 7.66e-21   NR XP_013434809.1 51315 g11602 i0 54.4 1.89795918367347 79 35 96.7 1 7 243 887 964 XP_013434809.1 Dynein heavy chain 3, axonemal, related [Eimeria necatrix] diamond 465 95.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
27376284 27376284 PRJNA1215813_P_NODE_7783_length_281_cov_2.245192_g7703_i0 PRJNA1215813 7783 281 2.245192 6.30898952 Cryptosporidium 5806 SAR_Eukaryotes SAR_Eukaryotes 119 3.0799999999999997e-30   NR KAF7458983.1 83540 g7703 i0 65.9 4.53736654804271 85 29 90.7 0 264 10 2 86 KAF7458983.1 phosphoglycerate mutase family protein [Cryptosporidium felis] diamond 1275 120 0.991666666666667 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium felis
27736402 27736402 PRJNA1215813_P_NODE_1684_length_573_cov_1.840000_g1606_i0 PRJNA1215813 1684 573 1.84 10.5432 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 206 5.37e-64   NR OEH76901.1 88456 g1606 i0 60.7 3.73821989528796 183 72 95.8 0 570 22 29 211 OEH76901.1 ribosomal protein rpl19 [Cyclospora cayetanensis] diamond 2142 206 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
32178110 32178110 PRJNA1215813_P_NODE_11078_length_247_cov_0.896552_g10998_i0 PRJNA1215813 11078 247 0.896552 2.21448344 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 107 9.13e-25   NR XP_013353859.1 44415 g10998 i0 63.3 13.5303643724696 79 29 96 0 245 9 462 540 XP_013353859.1 LOW QUALITY PROTEIN: elongation factor 2, putative [Eimeria mitis] diamond 3342 108 0.990740740740741 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
32241510 32241510 PRJNA1215813_P_NODE_5078_length_342_cov_1.449814_g4998_i0 PRJNA1215813 5078 342 1.449814 4.95836388 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 105 1.17e-24   NR XP_029215054.1 94643 g4998 i0 52.5 4.58771929824561 101 48 88.6 0 30 332 145 245 XP_029215054.1 putative integral membrane protein, GNS1/SUR4 family protein [Besnoitia besnoiti] diamond 1569 106 0.990566037735849 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
32304784 32304784 PRJNA1215813_P_NODE_4999_length_344_cov_1.726937_g4919_i0 PRJNA1215813 4999 344 1.726937 5.94066328 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 95.5 2.21e-20   NR AAC47173.1 5803 g4919 i0 46.6 5.00581395348837 116 58 98.5 2 2 340 206 320 AAC47173.1 heat shock protein 90, partial [Eimeria bovis] diamond 1722 95.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria bovis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;