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contig_metadata

14 rows where analysis = "diamond", bioproject = "PRJNA1215774" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 14 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1215774 · 14 ✖

analysis 1

  • diamond · 14 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5434878 5434878 PRJNA1215774_P_NODE_84405_length_241_cov_0.916667_g84085_i0 PRJNA1215774 84405 241 0.916667 2.20916747 Myxococcota bacterium 2818507 Bacteria Bacteria 149 8.41e-44   NR MEZ0312878.1 2818507 g84085 i0 93.8 0.995850622406639 80 5 99.6 0 1 240 81 160 MEZ0312878.1 hypoxanthine phosphoribosyltransferase [Myxococcota bacterium] diamond 240 149 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
26660874 26660874 PRJNA1215774_P_NODE_53421_length_288_cov_1.372093_g53101_i0 PRJNA1215774 53421 288 1.372093 3.95162784 Archangium sp. 1872627 Bacteria Bacteria 71.2 6.01e-12   NR MBL8915066.1 1872627 g53101 i0 88.6 0.364583333333333 35 4 36.5 0 1 105 443 477 MBL8915066.1 poly(A) polymerase [Archangium sp.] diamond 105 71.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium sp.
26660876 26660876 PRJNA1215774_P_NODE_72261_length_249_cov_0.875000_g71941_i0 PRJNA1215774 72261 249 0.875 2.17875 Myxococcales bacterium 2026763 Bacteria Bacteria 157 1.54e-42   NR MBL8684601.1 2026763 g71941 i0 90.4 1 83 8 100 0 1 249 833 915 MBL8684601.1 hypothetical protein [Myxococcales bacterium] diamond 249 157 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
27167348 27167348 PRJNA1215774_P_NODE_65722_length_257_cov_1.358696_g65402_i0 PRJNA1215774 65722 257 1.358696 3.49184872 Kofleriaceae bacterium 2212474 Bacteria Bacteria 130 6.41e-35   NR HET7502329.1 2212474 g65402 i0 80 3.96887159533074 85 17 99.2 0 256 2 175 259 HET7502329.1 LysR family transcriptional regulator [Kofleriaceae bacterium] diamond 1020 130 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
27830754 27830754 PRJNA1215774_P_NODE_62364_length_265_cov_1.557292_g62044_i0 PRJNA1215774 62364 265 1.557292 4.1268238 Anaeromyxobacteraceae bacterium 2510643 Bacteria Bacteria 44.3 0.0141   NR HET8733811.1 2510643 g62044 i0 52.9 0.984905660377358 51 21 56.6 2 159 10 6 54 HET8733811.1 hypothetical protein [Anaeromyxobacteraceae bacterium] diamond 261 44.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae   Anaeromyxobacteraceae bacterium
28493959 28493959 PRJNA1215774_P_NODE_73967_length_248_cov_0.880000_g73647_i0 PRJNA1215774 73967 248 0.88 2.1824 Polyangiales bacterium 3034171 Bacteria Bacteria 100 1.37e-22   NR MFO0625250.1 3034171 g73647 i0 74.1 0.979838709677419 81 18 98 3 244 2 4 81 MFO0625250.1 hypothetical protein [Polyangiales bacterium] diamond 243 100 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
29377947 29377947 PRJNA1215774_P_NODE_80129_length_244_cov_0.900585_g79809_i0 PRJNA1215774 80129 244 0.900585 2.1974274 Archangium sp. 1872627 Bacteria Bacteria 115 1.49e-28   NR MBL8913544.1 1872627 g79809 i0 70.9 0.971311475409836 79 23 97.1 0 7 243 144 222 MBL8913544.1 choice-of-anchor D domain-containing protein [Archangium sp.] diamond 237 115 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium sp.
29788228 29788228 PRJNA1215774_P_NODE_76291_length_246_cov_0.890173_g75971_i0 PRJNA1215774 76291 246 0.890173 2.18982558 Archangium sp. 1872627 Bacteria Bacteria 147 3.91e-39   NR MBL8916053.1 1872627 g75971 i0 92.6 0.98780487804878 81 6 98.8 0 245 3 80 160 MBL8916053.1 FtsX-like permease family protein [Archangium sp.] diamond 243 147 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium sp.
30452072 30452072 PRJNA1215774_P_NODE_73213_length_248_cov_0.880000_g72893_i0 PRJNA1215774 73213 248 0.88 2.1824 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 46.6 4.89e-4   NR MBC7793731.1 2026735 g72893 i0 61.5 0.471774193548387 39 15 47.2 0 2 118 77 115 MBC7793731.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 117 46.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30596896 30596896 PRJNA1215774_P_NODE_73353_length_248_cov_0.880000_g73033_i0 PRJNA1215774 73353 248 0.88 2.1824 Myxococcia 32015 Bacteria Bacteria 77.4 2.51e-14   NR MBL9020065.1 2026763 g73033 i0 50 8.72177419354839 80 40 96.8 0 243 4 590 669 MBL9020065.1 FecR domain-containing protein [Myxococcales bacterium] diamond 2163 77.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
30799249 30799249 PRJNA1215774_P_NODE_83294_length_242_cov_0.911243_g82974_i0 PRJNA1215774 83294 242 0.911243 2.20520806 Myxococcales bacterium 2026763 Bacteria Bacteria 162 6.74e-47   NR MBL8680229.1 2026763 g82974 i0 100 0.991735537190083 80 0 99.2 0 2 241 46 125 MBL8680229.1 flippase-like domain-containing protein [Myxococcales bacterium] diamond 240 162 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
31209627 31209627 PRJNA1215774_P_NODE_72355_length_249_cov_0.875000_g72035_i0 PRJNA1215774 72355 249 0.875 2.17875 Myxococcales bacterium 2026763 Bacteria Bacteria 68.9 2.36e-11   NR MCA9581090.1 2026763 g72035 i0 48.8 0.987951807228916 82 40 96.4 2 249 10 249 330 MCA9581090.1 hypothetical protein [Myxococcales bacterium] diamond 246 68.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
31431497 31431497 PRJNA1215774_P_NODE_71416_length_249_cov_0.875000_g71096_i0 PRJNA1215774 71416 249 0.875 2.17875 Myxococcota bacterium 2818507 Bacteria Bacteria 101 7.74e-23   NR MDQ3034256.1 2818507 g71096 i0 62.8 0.939759036144578 78 25 94 1 16 249 276 349 MDQ3034256.1 DUF4388 domain-containing protein [Myxococcota bacterium] diamond 234 101 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
31589856 31589856 PRJNA1215774_P_NODE_79196_length_244_cov_0.900585_g78876_i0 PRJNA1215774 79196 244 0.900585 2.1974274 Polyangiales bacterium 3034171 Bacteria Bacteria 62.4 4.35e-9   NR MEZ4329816.1 3034171 g78876 i0 38.9 1.10655737704918 90 46 99.6 2 2 244 312 401 MEZ4329816.1 FHA domain-containing protein [Polyangiales bacterium] diamond 270 62.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;