contig_metadata
11 rows where analysis = "diamond", bioproject = "PRJNA1215774" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26819711 | 26819711 | PRJNA1215774_P_NODE_69381_length_251_cov_0.865169_g69061_i0 | PRJNA1215774 | 69381 | 251 | 0.865169 | 2.17157419 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 156 | 3.4e-42 | NR | MDD7672200.1 | 2044939 | g69061 | i0 | 83.1 | 5.90438247011952 | 83 | 14 | 99.2 | 0 | 3 | 251 | 262 | 344 | MDD7672200.1 LuxR C-terminal-related transcriptional regulator [Clostridia bacterium] | diamond | 1482 | 156 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 27104126 | 27104126 | PRJNA1215774_P_NODE_67842_length_252_cov_1.312849_g67522_i0 | PRJNA1215774 | 67842 | 252 | 1.312849 | 3.30837948 | Oscillibacter sp. ER4 | 1519439 | Bacteria | Bacteria | 164 | 5e-48 | NR | WP_033121361.1 | 1519439 | g67522 | i0 | 100 | 0.976190476190476 | 82 | 0 | 97.6 | 0 | 6 | 251 | 44 | 125 | WP_033121361.1 diacylglycerol/lipid kinase family protein [Oscillibacter sp. ER4] | diamond | 246 | 164 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Oscillibacter | Oscillibacter sp. ER4 | ||
| 27515068 | 27515068 | PRJNA1215774_P_NODE_82503_length_242_cov_0.911243_g82183_i0 | PRJNA1215774 | 82503 | 242 | 0.911243 | 2.20520806 | Clostridioides difficile | 1496 | Bacteria | Bacteria | 59.3 | 1.34e-9 | NR | WP_330614520.1 | 1496 | g82183 | i0 | 100 | 0.384297520661157 | 31 | 0 | 38.4 | 0 | 154 | 62 | 1 | 31 | WP_330614520.1 hypothetical protein, partial [Clostridioides difficile] | diamond | 93 | 59.3 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Clostridioides | Clostridioides difficile | ||
| 27673093 | 27673093 | PRJNA1215774_P_NODE_70564_length_250_cov_0.870056_g70244_i0 | PRJNA1215774 | 70564 | 250 | 0.870056 | 2.17514 | Peptoniphilus | 162289 | Bacteria | Bacteria | 132 | 1.81e-36 | NR | WP_023055239.1 | 162289 | g70244 | i0 | 100 | 0.756 | 63 | 0 | 75.6 | 0 | 189 | 1 | 1 | 63 | WP_023055239.1 MULTISPECIES: DUF2249 domain-containing protein [Peptoniphilus] | diamond | 189 | 132 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Peptoniphilus | |||
| 27957132 | 27957132 | PRJNA1215774_P_NODE_75865_length_246_cov_1.520231_g75545_i0 | PRJNA1215774 | 75865 | 246 | 1.520231 | 3.73976826 | Staphylococcus sp. HMSC | 29387 | Bacteria | Bacteria | 157 | 6.9099999999999986e-43 | NR | WP_070812542.1 | 1715065 | g75545 | i0 | 100 | 0.98780487804878 | 81 | 0 | 98.8 | 0 | 244 | 2 | 287 | 367 | WP_070812542.1 DNA topoisomerase III [Staphylococcus sp. HMSC034G07] | diamond | 243 | 157 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus sp. HMSC034G07 | ||
| 28083300 | 28083300 | PRJNA1215774_P_NODE_74625_length_247_cov_0.885057_g74305_i0 | PRJNA1215774 | 74625 | 247 | 0.885057 | 2.18609079 | unclassified Paenibacillus | 185978 | Bacteria | Bacteria | 43.5 | 0.0207 | NR | WP_216537734.1 | 185978 | g74305 | i0 | 31.9 | 1.74898785425101 | 72 | 45 | 82.6 | 1 | 223 | 20 | 249 | 320 | WP_216537734.1 MULTISPECIES: ammonium transporter [unclassified Paenibacillus] | diamond | 432 | 43.5 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | |||
| 28449675 | 28449675 | PRJNA1215774_P_NODE_32806_length_369_cov_1.037162_g32486_i0 | PRJNA1215774 | 32806 | 369 | 1.037162 | 3.82712778 | FCB group | 1783270 | Bacteria | Bacteria | 107 | 2.02e-27 | NR | MBR2505770.1 | 1903720 | g32486 | i0 | 50.5 | 6.0650406504065 | 103 | 51 | 83.7 | 0 | 368 | 60 | 11 | 113 | MBR2505770.1 GPW/gp25 family protein [Bacilli bacterium] | diamond | 2238 | 108 | 0.990740740740741 | Bacteria | Bacillati | Bacillota | Bacilli | Bacilli bacterium | |||||
| 30577965 | 30577965 | PRJNA1215774_P_NODE_42873_length_322_cov_1.040161_g42553_i0 | PRJNA1215774 | 42873 | 322 | 1.040161 | 3.34931842 | Gracilibacteraceae bacterium | 2699748 | Bacteria | Bacteria | 44.7 | 0.0208 | NR | NLK34148.1 | 2699748 | g42553 | i0 | 38.3 | 0.437888198757764 | 47 | 29 | 43.8 | 0 | 121 | 261 | 574 | 620 | NLK34148.1 glycosyl transferase [Gracilibacteraceae bacterium] | diamond | 141 | 44.7 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Gracilibacteraceae | Gracilibacteraceae bacterium | |||
| 30641249 | 30641249 | PRJNA1215774_P_NODE_70073_length_250_cov_0.870056_g69753_i0 | PRJNA1215774 | 70073 | 250 | 0.870056 | 2.17514 | Clostridium sp. CAG:492 | 1262813 | Bacteria | Bacteria | 175 | 2.71e-51 | NR | CDA30803.1 | 1262813 | g69753 | i0 | 100 | 0.984 | 82 | 0 | 98.4 | 0 | 248 | 3 | 83 | 164 | CDA30803.1 putative uncharacterized protein [Clostridium sp. CAG:492] | diamond | 246 | 175 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium sp. CAG:492 | ||
| 31052425 | 31052425 | PRJNA1215774_P_NODE_80035_length_244_cov_0.900585_g79715_i0 | PRJNA1215774 | 80035 | 244 | 0.900585 | 2.1974274 | Lachnospira eligens | 39485 | Bacteria | Bacteria | 110 | 5.850000000000001e-26 | NR | WP_349156672.1 | 39485 | g79715 | i0 | 100 | 1.73360655737705 | 47 | 0 | 57.8 | 0 | 243 | 103 | 507 | 553 | WP_349156672.1 GH25 family lysozyme [Lachnospira eligens] | diamond | 423 | 110 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospira | Lachnospira eligens | ||
| 32095788 | 32095788 | PRJNA1215774_P_NODE_84078_length_241_cov_0.916667_g83758_i0 | PRJNA1215774 | 84078 | 241 | 0.916667 | 2.20916747 | Bacillus mycoides | 1405 | Bacteria | Bacteria | 58.2 | 9.71e-9 | NR | WP_256492806.1 | 1405 | g83758 | i0 | 50 | 0.622406639004149 | 50 | 25 | 62.2 | 0 | 150 | 1 | 7 | 56 | WP_256492806.1 P27 family phage terminase small subunit [Bacillus mycoides] | diamond | 150 | 58.2 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus mycoides |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;