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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA1215774" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 13 ✖

bioproject 1

  • PRJNA1215774 · 13 ✖

analysis 1

  • diamond · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14360436 14360436 PRJNA1215774_P_NODE_69632_length_250_cov_1.740113_g69312_i0 PRJNA1215774 69632 250 1.740113 4.3502825 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 72 2e-12   NR HYE30524.1 2072417 g69312 i0 48.8 6.852 84 42 99.6 1 250 2 169 252 HYE30524.1 TonB-dependent receptor [Candidatus Methylomirabilota bacterium] diamond 1713 72 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
26883015 26883015 PRJNA1215774_P_NODE_60261_length_270_cov_1.563452_g59941_i0 PRJNA1215774 60261 270 1.563452 4.2213204 Minisyncoccota bacterium 2053589 Bacteria Bacteria 71.2 2.7e-13   NR MBP9782489.1 2053589 g59941 i0 42 0.977777777777778 88 49 97.8 2 266 3 33 118 MBP9782489.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 264 71.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27988701 27988701 PRJNA1215774_P_NODE_26385_length_414_cov_1.806452_g26065_i0 PRJNA1215774 26385 414 1.806452 7.47871128 Patescibacteria group bacterium 2052139 Bacteria Bacteria 53.1 3.83e-5   NR MDE2100585.1 2052139 g26065 i0 32.3 0.963768115942029 133 89 96.4 1 413 15 110 241 MDE2100585.1 DnaJ domain-containing protein [Patescibacteria group bacterium] diamond 399 53.1 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28367434 28367434 PRJNA1215774_P_NODE_84406_length_241_cov_0.916667_g84086_i0 PRJNA1215774 84406 241 0.916667 2.20916747 Candidatus Sumerlaeia bacterium 2715255 Bacteria Bacteria 50.1 9.19e-5   NR MCC5876835.1 2715255 g84086 i0 35.6 0.908713692946058 73 47 90.9 0 21 239 478 550 MCC5876835.1 hypothetical protein [Candidatus Sumerlaeia bacterium] diamond 219 50.1 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia       Candidatus Sumerlaeia bacterium
28430826 28430826 PRJNA1215774_P_NODE_81726_length_243_cov_0.905882_g81406_i0 PRJNA1215774 81726 243 0.905882 2.20129326 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 74.7 1.1e-14   NR HMQ96275.1 2026720 g81406 i0 64 0.617283950617284 50 15 58 1 5 145 92 141 HMQ96275.1 HIT family protein [Candidatus Saccharibacteria bacterium] diamond 150 74.7 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28525602 28525602 PRJNA1215774_P_NODE_75287_length_247_cov_0.885057_g74967_i0 PRJNA1215774 75287 247 0.885057 2.18609079 Minisyncoccia bacterium 3120121 Bacteria Bacteria 85.5 5.22e-19   NR MFN3693035.1 3120121 g74967 i0 75.5 0.643724696356275 53 13 64.4 0 3 161 94 146 MFN3693035.1 type II secretion system protein [Minisyncoccia bacterium] diamond 159 85.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia       Minisyncoccia bacterium
29617393 29617393 PRJNA1215774_P_NODE_75330_length_247_cov_0.885057_g75010_i0 PRJNA1215774 75330 247 0.885057 2.18609079 Bacteria 2 Bacteria Bacteria 118 4.51e-29   NR MBY0538354.1 2052139 g75010 i0 100 3.10931174089069 64 0 77.7 0 246 55 461 524 MBY0538354.1 hypothetical protein [Patescibacteria group bacterium] diamond 768 118 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
29807062 29807062 PRJNA1215774_P_NODE_74011_length_248_cov_0.880000_g73691_i0 PRJNA1215774 74011 248 0.88 2.1824 Bacteria 2 Bacteria Bacteria 68.9 2.29e-11   NR MCA9358153.1 2030810 g73691 i0 100 3.70161290322581 34 0 41.1 0 1 102 476 509 MCA9358153.1 ribonuclease Y [Candidatus Kaiserbacteria bacterium] diamond 918 68.9 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium
30483482 30483482 PRJNA1215774_P_NODE_67673_length_252_cov_1.720670_g67353_i0 PRJNA1215774 67673 252 1.72067 4.3360884 Candidatus Saccharibacteria bacterium 32-5 1970481 Bacteria Bacteria 120 1.84e-29   NR OYX53809.1 1970481 g67353 i0 69.9 1.97619047619048 83 25 98.8 0 251 3 458 540 OYX53809.1 MAG: hypothetical protein B7Y92_01820 [Candidatus Saccharibacteria bacterium 32-50-13] diamond 498 120 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-50-13
30767813 30767813 PRJNA1215774_P_NODE_75134_length_247_cov_0.885057_g74814_i0 PRJNA1215774 75134 247 0.885057 2.18609079 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 103 3.7e-25   NR HET6747498.1 2973664 g74814 i0 57.7 2.84210526315789 78 33 94.7 0 1 234 139 216 HET6747498.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 702 103 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
30989087 30989087 PRJNA1215774_P_NODE_82434_length_242_cov_0.911243_g82114_i0 PRJNA1215774 82434 242 0.911243 2.20520806 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 107 6.45e-25   NR MFN8544203.1 2838779 g82114 i0 71.3 0.991735537190083 80 23 99.2 0 3 242 747 826 MFN8544203.1 alanine--tRNA ligase [Candidatus Binatia bacterium] diamond 240 107 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31589853 31589853 PRJNA1215774_P_NODE_71716_length_249_cov_0.875000_g71396_i0 PRJNA1215774 71716 249 0.875 2.17875 Candidatus Saccharibacteria bacterium 49-2 1895829 Bacteria Bacteria 150 1.77e-40   NR OJU88086.1 1895829 g71396 i0 95.1 0.975903614457831 81 4 97.6 0 248 6 214 294 OJU88086.1 MAG: DNA primase [Candidatus Saccharibacteria bacterium 49-20] diamond 243 150 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 49-20
32539029 32539029 PRJNA1215774_P_NODE_74699_length_247_cov_0.885057_g74379_i0 PRJNA1215774 74699 247 0.885057 2.18609079 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 89 7.320000000000001e-21   NR MDB5180837.1 2026720 g74379 i0 93.5 1.11740890688259 46 3 55.9 0 139 2 3 48 MDB5180837.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 276 89 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;