RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

36 rows where analysis = "diamond", bioproject = "PRJNA1214993" and tax_phylum = "Bacillota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Bacillota · 36 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1214993 · 36 ✖

analysis 1

  • diamond · 36 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3595922 3595922 PRJNA1214993_P_NODE_24663_length_244_cov_0.912281_g24477_i0 PRJNA1214993 24663 244 0.912281 2.22596564 Phascolarctobacterium succinatutens 626940 Bacteria Bacteria 144 1.31e-39   NR WP_337765864.1 626940 g24477 i0 85.2 3.98360655737705 81 12 99.6 0 244 2 173 253 WP_337765864.1 phosphopyruvate hydratase, partial [Phascolarctobacterium succinatutens] diamond 972 144 1 Bacteria   Bacillati Bacillota Negativicutes Acidaminococcales Acidaminococcaceae Phascolarctobacterium Phascolarctobacterium succinatutens
4873513 4873513 PRJNA1214993_P_NODE_15764_length_281_cov_1.197115_g15578_i0 PRJNA1214993 15764 281 1.197115 3.36389315 Mogibacterium sp. 2049035 Bacteria Bacteria 86.7 1.91e-17   NR MBQ6500692.1 2049035 g15578 i0 95.7 2.50889679715302 47 2 50.2 0 3 143 193 239 MBQ6500692.1 hypothetical protein [Mogibacterium sp.] diamond 705 86.7 1 Bacteria   Bacillati Bacillota Clostridia Peptostreptococcales Anaerovoracaceae Mogibacterium Mogibacterium sp.
6148225 6148225 PRJNA1214993_P_NODE_25205_length_243_cov_1.441176_g25019_i0 PRJNA1214993 25205 243 1.441176 3.50205768 Bacteria candidate phyla 1783234 Bacteria Bacteria 121 6.49e-30   NR WP_074402529.1 2748 g25019 i0 72.2 95 79 22 97.5 0 238 2 468 546 WP_074402529.1 aconitate hydratase AcnA [Carnobacterium divergens] diamond 23085 122 0.991803278688525 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Carnobacteriaceae Carnobacterium Carnobacterium divergens
12524075 12524075 PRJNA1214993_P_NODE_22570_length_248_cov_0.880000_g22384_i0 PRJNA1214993 22570 248 0.88 2.1824 FCB group 1783270 Bacteria Bacteria 57.4 8.44e-8   NR WP_010329842.1 72361 g22384 i0 52.7 2.78225806451613 55 26 66.5 0 175 11 109 163 WP_010329842.1 AP2 domain-containing protein [Bacillus vallismortis] diamond 690 57.4 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Bacillus Bacillus vallismortis
14359352 14359352 PRJNA1214993_P_NODE_24212_length_245_cov_0.906977_g24026_i0 PRJNA1214993 24212 245 0.906977 2.22209365 Clostridiales bacterium 1898207 Bacteria Bacteria 82.8 2.91e-16   NR MCI7573422.1 1898207 g24026 i0 97.7 0.52653061224489806 43 1 52.7 0 3 131 485 527 MCI7573422.1 FAD-dependent oxidoreductase [Clostridiales bacterium] diamond 129 82.8 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales     Clostridiales bacterium
26724020 26724020 PRJNA1214993_P_NODE_21721_length_249_cov_0.886364_g21535_i0 PRJNA1214993 21721 249 0.886364 2.20704636 Jeotgalicoccus aerolatus 709510 Bacteria Bacteria 150 1.4299999999999996e-43   NR WP_186090911.1 709510 g21535 i0 98.8 0.987951807228916 82 1 98.8 0 3 248 5 86 WP_186090911.1 5-oxoprolinase subunit PxpB [Jeotgalicoccus aerolatus] diamond 246 150 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Staphylococcaceae Jeotgalicoccus Jeotgalicoccus aerolatus
26851393 26851393 PRJNA1214993_P_NODE_19661_length_253_cov_0.866667_g19475_i0 PRJNA1214993 19661 253 0.866667 2.19266751 unclassified Ruminococcus 2608920 Bacteria Bacteria 158 1.18e-42   NR WP_255884181.1 2608920 g19475 i0 92.9 0.99604743083004 84 6 99.6 0 253 2 626 709 WP_255884181.1 MULTISPECIES: phosphoribosylformylglycinamidine synthase [unclassified Ruminococcus] diamond 252 158 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae Ruminococcus  
26964874 26964874 PRJNA1214993_P_NODE_21822_length_249_cov_0.886364_g21636_i0 PRJNA1214993 21822 249 0.886364 2.20704636 Bacillati 1783272 Bacteria Bacteria 48.9 2.63e-4   NR MBD5468589.1 1898203 g21636 i0 63.6 1.56626506024096 33 12 39.8 0 249 151 119 151 MBD5468589.1 hypothetical protein [Lachnospiraceae bacterium] diamond 390 48.9 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae   Lachnospiraceae bacterium
27009261 27009261 PRJNA1214993_P_NODE_19982_length_252_cov_1.664804_g19796_i0 PRJNA1214993 19982 252 1.664804 4.19530608 Loigolactobacillus backii 375175 Bacteria Bacteria 69.3 3.33e-12   NR WP_100070971.1 375175 g19796 i0 42.5 0.952380952380952 80 46 95.2 0 246 7 50 129 WP_100070971.1 sulfurtransferase-like selenium metabolism protein YedF [Loigolactobacillus backii] diamond 240 69.3 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Loigolactobacillus Loigolactobacillus backii
27357294 27357294 PRJNA1214993_P_NODE_19683_length_253_cov_0.866667_g19497_i0 PRJNA1214993 19683 253 0.866667 2.19266751 Mediterraneibacter sp. 2316022 Bacteria Bacteria 74.7 9.95e-14   NR MFR9145418.1 2316022 g19497 i0 55.4 5.66798418972332 65 29 77.1 0 217 23 7 71 MFR9145418.1 polyamine aminopropyltransferase [Mediterraneibacter sp.] diamond 1434 74.7 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Mediterraneibacter Mediterraneibacter sp.
27388916 27388916 PRJNA1214993_P_NODE_19703_length_253_cov_0.866667_g19517_i0 PRJNA1214993 19703 253 0.866667 2.19266751 Ruminococcus flavefaciens 1265 Bacteria Bacteria 121 5.58e-30   NR WP_303821560.1 1265 g19517 i0 69 0.99604743083004 84 26 99.6 0 2 253 294 377 WP_303821560.1 hypothetical protein [Ruminococcus flavefaciens] diamond 252 121 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae Ruminococcus Ruminococcus flavefaciens
27786617 27786617 PRJNA1214993_P_NODE_22604_length_248_cov_0.880000_g22418_i0 PRJNA1214993 22604 248 0.88 2.1824 Caldibacillus 1276290 Bacteria Bacteria 159 2.8299999999999998e-43   NR WP_276666545.1 301148 g22418 i0 98.8 2.9758064516129 82 1 99.2 0 2 247 233 314 WP_276666545.1 endopeptidase La [Caldibacillus debilis] diamond 738 159 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Caldibacillus Caldibacillus debilis
27862236 27862236 PRJNA1214993_P_NODE_18525_length_260_cov_1.668449_g18339_i0 PRJNA1214993 18525 260 1.668449 4.3379674 Symbiobacteriaceae bacterium 2602712 Bacteria Bacteria 55.8 8.95e-7   NR HEY3367363.1 2602712 g18339 i0 51.8 0.646153846153846 56 27 64.6 0 205 38 68 123 HEY3367363.1 lipase family protein [Symbiobacteriaceae bacterium] diamond 168 55.8 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Symbiobacteriaceae   Symbiobacteriaceae bacterium
27862239 27862239 PRJNA1214993_P_NODE_20685_length_251_cov_0.876404_g20499_i0 PRJNA1214993 20685 251 0.876404 2.19977404 Holdemanella biformis 1735 Bacteria Bacteria 92.8 1.43e-20   NR WP_270465350.1 1735 g20499 i0 100 5.91633466135458 45 0 53.8 0 249 115 240 284 WP_270465350.1 transposase [Holdemanella biformis] diamond 1485 92.8 1 Bacteria   Bacillati Bacillota Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Holdemanella Holdemanella biformis
28241043 28241043 PRJNA1214993_P_NODE_20686_length_251_cov_0.876404_g20500_i0 PRJNA1214993 20686 251 0.876404 2.19977404 Clostridiaceae bacterium 1898204 Bacteria Bacteria 40.8 0.018   NR NMB96903.1 1898204 g20500 i0 42.9 0.50199203187251 42 24 50.2 0 128 3 3 44 NMB96903.1 glycerophosphodiester phosphodiesterase [Clostridiaceae bacterium] diamond 126 40.8 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae   Clostridiaceae bacterium
28304351 28304351 PRJNA1214993_P_NODE_21086_length_250_cov_0.881356_g20900_i0 PRJNA1214993 21086 250 0.881356 2.20339 Anaerotignum sp. 2039241 Bacteria Bacteria 167 9.59e-51   NR MBP3628281.1 2039241 g20900 i0 97.6 0.996 83 2 99.6 0 2 250 76 158 MBP3628281.1 V-type ATP synthase subunit A [Anaerotignum sp.] diamond 249 167 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Anaerotignaceae Anaerotignum Anaerotignum sp.
28557118 28557118 PRJNA1214993_P_NODE_4347_length_511_cov_1.757991_g4162_i0 PRJNA1214993 4347 511 1.757991 8.98333401 Eubacteriales bacterium 2831996 Bacteria Bacteria 51.6 4.92e-4   NR MDD3765982.1 2831996 g4162 i0 45.8 0.281800391389432 48 25 27.6 1 204 64 3084 3131 MDD3765982.1 ZmpA/ZmpB/ZmpC family metallo-endopeptidase-related protein [Eubacteriales bacterium] diamond 144 51.6 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales     Eubacteriales bacterium
28841033 28841033 PRJNA1214993_P_NODE_4328_length_512_cov_2.833713_g4143_i0 PRJNA1214993 4328 512 2.833713 14.50861056 Eubacteriales bacterium 2831996 Bacteria Bacteria 55.5 2.34e-5   NR MDD3765982.1 2831996 g4143 i0 46 0.29296875 50 26 28.7 1 311 457 3082 3131 MDD3765982.1 ZmpA/ZmpB/ZmpC family metallo-endopeptidase-related protein [Eubacteriales bacterium] diamond 150 55.5 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales     Eubacteriales bacterium
29030803 29030803 PRJNA1214993_P_NODE_25908_length_242_cov_0.923077_g25722_i0 PRJNA1214993 25908 242 0.923077 2.23384634 Oscillospiraceae bacterium 2485925 Bacteria Bacteria 134 1.68e-37   NR UKI20101.1 2485925 g25722 i0 88.8 0.991735537190083 80 9 99.2 0 2 241 75 154 UKI20101.1 MAG: electron transport complex subunit E [Oscillospiraceae bacterium] diamond 240 134 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae   Oscillospiraceae bacterium
29220184 29220184 PRJNA1214993_P_NODE_20029_length_252_cov_1.307263_g19843_i0 PRJNA1214993 20029 252 1.307263 3.29430276 Heliobacterium chlorum 2698 Bacteria Bacteria 57.8 5.38e-8   NR WP_188039146.1 2698 g19843 i0 60 0.476190476190476 40 16 47.6 0 1 120 20 59 WP_188039146.1 hypothetical protein [Heliobacterium chlorum] diamond 120 57.8 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Heliobacteriaceae Heliobacterium Heliobacterium chlorum
29333574 29333574 PRJNA1214993_P_NODE_24669_length_244_cov_0.912281_g24483_i0 PRJNA1214993 24669 244 0.912281 2.22596564 Bacillota 1239 Bacteria Bacteria 100 1.83e-22   NR MBR2423145.1 2485925 g24483 i0 94.4 1.99180327868852 54 3 66.4 0 4 165 1017 1070 MBR2423145.1 carbamoyl-phosphate synthase large subunit [Oscillospiraceae bacterium] diamond 486 100 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae   Oscillospiraceae bacterium
29428015 29428015 PRJNA1214993_P_NODE_16389_length_276_cov_1.389163_g16203_i0 PRJNA1214993 16389 276 1.389163 3.83408988 Bacteria 2 Bacteria Bacteria 84.7 9.9e-17   NR MBQ2694309.1 2044939 g16203 i0 97.5 0.869565217391304 40 1 43.5 0 157 276 1 40 MBQ2694309.1 DNA-directed RNA polymerase subunit beta [Clostridia bacterium] diamond 240 84.7 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
29440748 29440748 PRJNA1214993_P_NODE_25410_length_243_cov_0.917647_g25224_i0 PRJNA1214993 25410 243 0.917647 2.22988221 Petrocella sp. FN5 3032002 Bacteria Bacteria 88.6 8.57e-19   NR WP_275841563.1 3032002 g25224 i0 50.6 1.91358024691358 77 38 95.1 0 237 7 227 303 WP_275841563.1 adenosylcobinamide-phosphate synthase CbiB [Petrocella sp. FN5] diamond 465 88.6 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Vallitaleaceae Petrocella Petrocella sp. FN5
29472339 29472339 PRJNA1214993_P_NODE_23630_length_246_cov_0.901734_g23444_i0 PRJNA1214993 23630 246 0.901734 2.21826564 Angelakisella massiliensis 1871018 Bacteria Bacteria 123 1.68e-31   NR WP_071428949.1 1871018 g23444 i0 71.6 1.97560975609756 81 23 98.8 0 245 3 246 326 WP_071428949.1 glutamine synthetase family protein [Angelakisella massiliensis] diamond 486 123 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae Angelakisella Angelakisella massiliensis
29661620 29661620 PRJNA1214993_P_NODE_20770_length_251_cov_0.865169_g20584_i0 PRJNA1214993 20770 251 0.865169 2.17157419 Caldibacillus debilis 301148 Bacteria Bacteria 173 5.52e-49   NR WP_333524245.1 301148 g20584 i0 98.8 0.99203187250996006 83 1 99.2 0 249 1 462 544 WP_333524245.1 LTA synthase family protein [Caldibacillus debilis] diamond 249 173 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Caldibacillus Caldibacillus debilis
29756658 29756658 PRJNA1214993_P_NODE_19891_length_253_cov_0.866667_g19705_i0 PRJNA1214993 19891 253 0.866667 2.19266751 Clostridia bacterium 2044939 Bacteria Bacteria 174 2.48e-49   NR MBO5647126.1 2044939 g19705 i0 100 0.99604743083004 84 0 99.6 0 253 2 278 361 MBO5647126.1 beta-galactosidase [Clostridia bacterium] diamond 252 174 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
29914874 29914874 PRJNA1214993_P_NODE_13531_length_300_cov_1.370044_g13345_i0 PRJNA1214993 13531 300 1.370044 4.110132 Butyrivibrio sp. 28121 Bacteria Bacteria 43.5 0.0385   NR MCR5556545.1 28121 g13345 i0 29.7 0.91 91 56 83 2 28 276 153 243 MCR5556545.1 HAMP domain-containing histidine kinase [Butyrivibrio sp.] diamond 273 43.5 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Butyrivibrio Butyrivibrio sp.
29914893 29914893 PRJNA1214993_P_NODE_24191_length_245_cov_0.906977_g24005_i0 PRJNA1214993 24191 245 0.906977 2.22209365 Faecalibacillus faecis 1982628 Bacteria Bacteria 91.3 3.86e-20   NR WP_117816175.1 1982628 g24005 i0 72.1 2.82857142857143 61 15 72.2 1 245 69 47 107 WP_117816175.1 prolipoprotein diacylglyceryl transferase [Faecalibacillus faecis] diamond 693 91.3 1 Bacteria   Bacillati Bacillota Erysipelotrichia Erysipelotrichales Coprobacillaceae Faecalibacillus Faecalibacillus faecis
30894301 30894301 PRJNA1214993_P_NODE_20114_length_252_cov_0.871508_g19928_i0 PRJNA1214993 20114 252 0.871508 2.19620016 Abyssicoccus albus 1817405 Bacteria Bacteria 50.1 1.04e-4   NR WP_414731050.1 1817405 g19928 i0 100 0.285714285714286 24 0 28.6 0 74 3 1 24 WP_414731050.1 nucleotide sugar dehydrogenase [Abyssicoccus albus] diamond 72 50.1 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Abyssicoccaceae Abyssicoccus Abyssicoccus albus
30989059 30989059 PRJNA1214993_P_NODE_20594_length_251_cov_0.876404_g20408_i0 PRJNA1214993 20594 251 0.876404 2.19977404 Oscillospiraceae bacterium 2485925 Bacteria Bacteria 150 1.62e-41   NR MBQ6431948.1 2485925 g20408 i0 90.4 0.99203187250996006 83 8 99.2 0 250 2 198 280 MBQ6431948.1 preprotein translocase subunit SecY [Oscillospiraceae bacterium] diamond 249 150 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae   Oscillospiraceae bacterium
31241570 31241570 PRJNA1214993_P_NODE_13315_length_303_cov_1.017391_g13129_i0 PRJNA1214993 13315 303 1.017391 3.08269473 Clostridium sporogenes 1509 Bacteria Bacteria 65.5 2.22e-11   NR WP_163238780.1 1509 g13129 i0 41 0.772277227722772 78 46 77.2 0 266 33 17 94 WP_163238780.1 H-type lectin domain-containing protein [Clostridium sporogenes] diamond 234 65.5 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium sporogenes
31368488 31368488 PRJNA1214993_P_NODE_24676_length_244_cov_0.912281_g24490_i0 PRJNA1214993 24676 244 0.912281 2.22596564 Ignavigranum ruoffiae 89093 Bacteria Bacteria 77.8 1.62e-14   NR WP_248416482.1 89093 g24490 i0 60.3 2.0655737704918 58 23 71.3 0 243 70 405 462 WP_248416482.1 MATE family efflux transporter [Ignavigranum ruoffiae] diamond 504 77.8 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Aerococcaceae Ignavigranum Ignavigranum ruoffiae
31545365 31545365 PRJNA1214993_P_NODE_12456_length_312_cov_2.502092_g12270_i0 PRJNA1214993 12456 312 2.502092 7.80652704 Clostridia 186801 Bacteria Bacteria 96.3 8.23e-21   NR MDY2700141.1 1898203 g12270 i0 83.9 12.5769230769231 56 7 53.8 1 307 140 385 438 MDY2700141.1 SpoIVB peptidase [Lachnospiraceae bacterium] diamond 3924 96.3 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae   Lachnospiraceae bacterium
31589811 31589811 PRJNA1214993_P_NODE_10996_length_332_cov_1.189189_g10810_i0 PRJNA1214993 10996 332 1.189189 3.94810748 Clostridium 1485 Bacteria Bacteria 63.5 1.5e-9   NR WP_143317596.1 1485 g10810 i0 36.6 1.6355421686747 93 57 84 1 310 32 1 91 WP_143317596.1 MULTISPECIES: hypothetical protein [Clostridium] diamond 543 63.5 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium  
32539002 32539002 PRJNA1214993_P_NODE_17719_length_266_cov_1.544041_g17533_i0 PRJNA1214993 17719 266 1.544041 4.10714906 Oscillospiraceae bacterium 2485925 Bacteria Bacteria 132 3.93e-36   NR MBQ3252398.1 2485925 g17533 i0 78.9 2.57142857142857 76 16 85.7 0 229 2 1 76 MBQ3252398.1 tRNA 2-thiocytidine biosynthesis protein TtcA [Oscillospiraceae bacterium] diamond 684 132 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae   Oscillospiraceae bacterium
32903911 32903911 PRJNA1214993_P_NODE_16080_length_278_cov_2.492683_g15894_i0 PRJNA1214993 16080 278 2.492683 6.92965874 Paenibacillaceae 186822 Bacteria Bacteria 109 1.03e-28   NR WP_204516782.1 1125967 g15894 i0 68.5 5.58992805755396 73 23 78.8 0 51 269 2 74 WP_204516782.1 group I truncated hemoglobin [Brevibacillus fulvus] diamond 1554 110 0.990909090909091 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Brevibacillus Brevibacillus fulvus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;