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contig_metadata

17 rows where analysis = "diamond", bioproject = "PRJNA1214993" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 17 ✖

tax_clade 1

bioproject 1

  • PRJNA1214993 · 17 ✖

analysis 1

  • diamond · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7983855 7983855 PRJNA1214993_P_NODE_9627_length_352_cov_1.813620_g9441_i0 PRJNA1214993 9627 352 1.81362 6.3839424 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 140 5.25e-37   NR XP_011132759.1 110365 g9441 i0 60.4 0.946022727272727 111 44 94.6 0 333 1 353 463 XP_011132759.1 putative transport Sec61 alpha subunit [Gregarina niphandrodes] diamond 333 140 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
17623103 17623103 PRJNA1214993_P_NODE_16194_length_277_cov_1.911765_g16008_i0 PRJNA1214993 16194 277 1.911765 5.29558905 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 135 3.92e-35   NR XP_029219843.1 94643 g16008 i0 69.9 3.82310469314079 93 24 96.4 1 6 272 219 311 XP_029219843.1 putative serine hydroxymethyltransferase 2 [Besnoitia besnoiti] diamond 1059 135 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
22007120 22007120 PRJNA1214993_P_NODE_22638_length_248_cov_0.880000_g22452_i0 PRJNA1214993 22638 248 0.88 2.1824 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 105 2.22e-24   NR XP_011134380.1 110365 g22452 i0 64.2 2.96370967741935 81 28 96.8 1 248 9 54 134 XP_011134380.1 DEAD-box ATP-dependent RNA helicase [Gregarina niphandrodes] diamond 735 105 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
26851408 26851408 PRJNA1214993_P_NODE_7121_length_404_cov_1.712991_g6936_i0 PRJNA1214993 7121 404 1.712991 6.92048364 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 85.9 5.12e-18   NR XP_028865997.1 189622 g6936 i0 37.5 1.06930693069307 144 71 96.5 4 8 397 1 139 XP_028865997.1 translationally-controlled tumor protein [Babesia ovata] diamond 432 85.9 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
27470829 27470829 PRJNA1214993_P_NODE_26243_length_242_cov_0.911243_g26057_i0 PRJNA1214993 26243 242 0.911243 2.20520806 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 80.5 1.88e-15   NR XP_013249147.1 5801 g26057 i0 75 3.85537190082645 52 13 64.5 0 156 1 116 167 XP_013249147.1 polyadenylate-binding protein, putative [Eimeria acervulina] diamond 933 80.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
28228232 28228232 PRJNA1214993_P_NODE_4606_length_496_cov_2.330969_g4421_i0 PRJNA1214993 4606 496 2.330969 11.56160624 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 181 1.3899999999999998e-54   NR OEH76901.1 88456 g4421 i0 61 6.47177419354839 159 62 96.2 0 3 479 47 205 OEH76901.1 ribosomal protein rpl19 [Cyclospora cayetanensis] diamond 3210 181 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
28746413 28746413 PRJNA1214993_P_NODE_19227_length_255_cov_1.681319_g19041_i0 PRJNA1214993 19227 255 1.681319 4.28736345 Babesia caballi 5871 SAR_Eukaryotes SAR_Eukaryotes 69.3 1.89e-11   NR XP_067715491.1 5871 g19041 i0 43.7 2.55294117647059 71 38 81.2 1 255 49 132 202 XP_067715491.1 translation initiation factor E4, putative [Babesia caballi] diamond 651 69.3 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia caballi
28828222 28828222 PRJNA1214993_P_NODE_24908_length_244_cov_0.912281_g24722_i0 PRJNA1214993 24908 244 0.912281 2.22596564 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 73.9 3.95e-13   NR XP_953957.1 5874 g24722 i0 45 5.86475409836066 80 44 98.4 0 4 243 833 912 XP_953957.1 phosphatidylinositol 4-kinase, putative [Theileria annulata] diamond 1431 74.3 0.994616419919246 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria annulata
28935923 28935923 PRJNA1214993_P_NODE_17608_length_267_cov_1.231959_g17422_i0 PRJNA1214993 17608 267 1.231959 3.28933053 Plasmodium ovale curtisi 864141 SAR_Eukaryotes SAR_Eukaryotes 44.7 0.00217   NR SBS84641.1 864141 g17422 i0 44.2 0.48314606741573 43 24 48.3 0 1 129 57 99 SBS84641.1 small ubiquitin-related modifier, putative [Plasmodium ovale curtisi] diamond 129 44.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium ovale
29365217 29365217 PRJNA1214993_P_NODE_24689_length_244_cov_0.912281_g24503_i0 PRJNA1214993 24689 244 0.912281 2.22596564 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 48.1 4.64e-4   NR CAL7862139.1 1344799 g24503 i0 40.3 2.91393442622951 77 43 94.7 1 12 242 726 799 CAL7862139.1 unnamed protein product [Sarcocystis calchasi] diamond 711 48.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi
30546589 30546589 PRJNA1214993_P_NODE_12253_length_315_cov_1.280992_g12067_i0 PRJNA1214993 12253 315 1.280992 4.0351248 Plasmodium ovale 36330 SAR_Eukaryotes SAR_Eukaryotes 48.1 0.00109   NR SBT77329.1 36330 g12067 i0 44.9 0.866666666666667 49 26 45.7 1 293 150 662 710 SBT77329.1 dynamin-like protein, putative [Plasmodium ovale] diamond 273 48.1 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium ovale
30546599 30546599 PRJNA1214993_P_NODE_19213_length_255_cov_1.714286_g19027_i0 PRJNA1214993 19213 255 1.714286 4.3714293 Babesia gibsoni 33632 SAR_Eukaryotes SAR_Eukaryotes 79 7.72e-17   NR KAK1443386.1 33632 g19027 i0 53.4 4.44705882352941 73 33 84.7 1 234 19 30 102 KAK1443386.1 hypothetical protein BgAZ_202620 [Babesia gibsoni] diamond 1134 79 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia gibsoni
31671665 31671665 PRJNA1214993_P_NODE_18417_length_261_cov_1.244681_g18231_i0 PRJNA1214993 18417 261 1.244681 3.24861741 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 115 7.539999999999999e-31   NR XP_013332946.1 5804 g18231 i0 90.2 133.919540229885 61 6 70.1 0 259 77 77 137 XP_013332946.1 ribosomal protein S23, putative [Eimeria maxima] diamond 34953 115 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
31811087 31811087 PRJNA1214993_P_NODE_23757_length_246_cov_0.890173_g23571_i0 PRJNA1214993 23757 246 0.890173 2.18982558 Sarcocystis calchasi 1344799 SAR_Eukaryotes SAR_Eukaryotes 49.3 1.9e-4   NR CAL7858741.1 1344799 g23571 i0 57.5 0.48780487804878 40 17 48.8 0 7 126 399 438 CAL7858741.1 unnamed protein product [Sarcocystis calchasi] diamond 120 49.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi
31842538 31842538 PRJNA1214993_P_NODE_5057_length_475_cov_2.335821_g4872_i0 PRJNA1214993 5057 475 2.335821 11.09514975 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 58.9 4.86e-7   NR AET50831.1 5802 g4872 i0 43.5 0.783157894736842 62 33 39.2 1 7 192 18 77 AET50831.1 hypothetical protein [Eimeria tenella] diamond 372 58.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
32064077 32064077 PRJNA1214993_P_NODE_21238_length_250_cov_0.881356_g21052_i0 PRJNA1214993 21238 250 0.881356 2.20339 Theileria orientalis 68886 SAR_Eukaryotes SAR_Eukaryotes 89 1.15e-20   NR UKJ88711.2 68886 g21052 i0 53.2 6.408 77 35 92.4 1 235 5 6 81 UKJ88711.2 60S ribosomal protein L35a [Theileria orientalis] diamond 1602 89 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria orientalis
32759358 32759358 PRJNA1214993_P_NODE_9900_length_348_cov_1.134545_g9714_i0 PRJNA1214993 9900 348 1.134545 3.9482166 Babesia microti strain RI 1133968 SAR_Eukaryotes SAR_Eukaryotes 110 8.989999999999999e-28   NR XP_021337160.1 1133968 g9714 i0 50.4 3.89655172413793 113 49 97.4 1 339 1 1 106 XP_021337160.1 large subunit ribosomal protein L18e [Babesia microti strain RI] diamond 1356 110 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia microti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;