RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA1204310" and tax_kingdom = "Heunggongvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 9 ✖

bioproject 1

  • PRJNA1204310 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9257631 9257631 PRJNA1204310_P_NODE_57328_length_247_cov_0.896552_g57031_i0 PRJNA1204310 57328 247 0.896552 2.21448344 Prochlorococcus phage P-TIM68 1542477 Viruses Viruses 69.7 1.17e-11   NR YP_009213605.1 1542477 g57031 i0 57 0.959514170040486 79 31 92.3 2 3 230 225 303 YP_009213605.1 head closure Hc2 [Prochlorococcus phage P-TIM68] diamond 237 69.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Pantevenvirales Kyanoviridae Haifavirus Haifavirus tim68
26851342 26851342 PRJNA1204310_P_NODE_53981_length_250_cov_0.881356_g53684_i0 PRJNA1204310 53981 250 0.881356 2.20339 Synechococcus phage S-CRES1 3038220 Viruses Viruses 132 1.28e-36   NR WGL30445.1 3038220 g53684 i0 79.5 0.996 83 17 99.6 0 250 2 64 146 WGL30445.1 FAD-dependent thymidylate synthase [Synechococcus phage S-CRES1] diamond 249 132 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Synechococcus phage S-CRES1
27660295 27660295 PRJNA1204310_P_NODE_51164_length_253_cov_0.866667_g50867_i0 PRJNA1204310 51164 253 0.866667 2.19266751 Kyanoviridae 2946160 Viruses Viruses 153 1.5e-44   NR YP_004322420.1 444860 g50867 i0 86.9 1.94466403162055 84 11 99.6 0 2 253 16 99 YP_004322420.1 thymidylate synthase [Synechococcus phage S-SM2] diamond 492 153 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Pantevenvirales Kyanoviridae Nilusvirus Nilusvirus ssm2
28272575 28272575 PRJNA1204310_P_NODE_61626_length_243_cov_0.917647_g61329_i0 PRJNA1204310 61626 243 0.917647 2.22988221 uncultured phage_MedDCM-OCT-S45-C4 2740801 Viruses Viruses 79 5.04e-15   NR YP_009778022.1 2740801 g61329 i0 56.8 1 81 33 97.5 2 5 241 25 105 YP_009778022.1 tail fiber protein [uncultured phage_MedDCM-OCT-S45-C4] diamond 243 79 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Autographivirales   Ashivirus Ashivirus S45C4
29459529 29459529 PRJNA1204310_P_NODE_36290_length_310_cov_0.877637_g35993_i0 PRJNA1204310 36290 310 0.877637 2.7206747 root 1 Root_unresolved Root_unresolved 64.3 3.42e-10   NR YP_007673165.1 754040 g35993 i0 55.1 1.52903225806452 69 29 66.8 2 207 1 30 96 YP_007673165.1 hypothetical protein SWQG_00019 [Synechococcus phage S-RIP2] diamond 474 64.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Autographivirales   Sednavirus Sednavirus SRIP2
31589783 31589783 PRJNA1204310_P_NODE_55056_length_249_cov_0.886364_g54759_i0 PRJNA1204310 55056 249 0.886364 2.20704636 uncultured Mediterranean phage MEDS5 group 1262075 Viruses Viruses 106 1.2999999999999998e-24   NR AFX83901.1 1262075 g54759 i0 76.1 1.62650602409639 67 16 80.7 0 3 203 316 382 AFX83901.1 phage major capsid protein [uncultured Mediterranean phage MEDS5 group] diamond 405 106 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       uncultured Mediterranean phage MEDS5 group
31747656 31747656 PRJNA1204310_P_NODE_36897_length_307_cov_1.000000_g36600_i0 PRJNA1204310 36897 307 1 3.07 Synechococcus phage S-CBWM1 2053653 Viruses Viruses 82 1.13e-15   NR YP_009816528.1 2053653 g36600 i0 54.9 0.801302931596091 82 29 76.2 3 3 236 395 472 YP_009816528.1 head maturation protease [Synechococcus phage S-CBWM1] diamond 246 82 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Aokuangvirus Aokuangvirus SCBWM1
31811048 31811048 PRJNA1204310_P_NODE_61957_length_242_cov_1.786982_g61660_i0 PRJNA1204310 61957 242 1.786982 4.32449644 Synechococcus phage S-SM2 444860 Viruses Viruses 113 6.160000000000001e-27   NR YP_004322186.1 444860 g61660 i0 62.8 0.966942148760331 78 29 96.7 0 240 7 1584 1661 YP_004322186.1 tail fiber protein [Synechococcus phage S-SM2] diamond 234 113 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Pantevenvirales Kyanoviridae Nilusvirus Nilusvirus ssm2
31969124 31969124 PRJNA1204310_P_NODE_56218_length_248_cov_0.891429_g55921_i0 PRJNA1204310 56218 248 0.891429 2.21074392 Synechococcus phage S-CRES3 3038222 Viruses Viruses 112 4.16e-30   NR WGL30760.1 3038222 g55921 i0 71.3 0.967741935483871 80 23 96.8 0 240 1 1 80 WGL30760.1 hypothetical protein SCRES3_gp103 [Synechococcus phage S-CRES3] diamond 240 112 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Synechococcus phage S-CRES3

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;