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contig_metadata

24 rows where analysis = "diamond", bioproject = "PRJNA1200128" and tax_phylum = "Streptophyta"

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tax_superkingdom 1

tax_phylum 1

  • Streptophyta · 24 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1200128 · 24 ✖

analysis 1

  • diamond · 24 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16904104 16904104 PRJNA1200128_S_NODE_13474_length_230_cov_1.475936_g13365_i0 PRJNA1200128 13474 230 1.475936 3.3946528 Salix dunnii 1413687 Plants Plants 90.1 2.6500000000000003e-21   NR KAF9683045.1 1413687 g13365 i0 93.3 1.18695652173913 45 3 58.7 0 229 95 68 112 KAF9683045.1 hypothetical protein SADUNF_Sadunf05G0171300 [Salix dunnii] diamond 273 90.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Salicaceae Salix Salix dunnii
16904235 16904235 PRJNA1200128_S_NODE_43434_length_157_cov_1.649123_g43325_i0 PRJNA1200128 43434 157 1.649123 2.58912311 Quercus rubra 3512 Plants Plants 100 2.62e-25   NR KAK4595688.1 3512 g43325 i0 100 0.993630573248408 52 0 99.4 0 157 2 117 168 KAK4595688.1 hypothetical protein RGQ29_013965 [Quercus rubra] diamond 156 100 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Quercus Quercus rubra
26597437 26597437 PRJNA1200128_S_NODE_4601_length_326_cov_1.381625_g4492_i0 PRJNA1200128 4601 326 1.381625 4.5040975 Tanacetum cinerariifolium 118510 Plants Plants 43.1 0.0357   NR GEZ90847.1 118510 g4492 i0 34.8 0.819018404907976 89 47 73.6 2 65 304 14 100 GEZ90847.1 hypothetical protein [Tanacetum cinerariifolium] diamond 267 43.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Tanacetum Tanacetum cinerariifolium
26882895 26882895 PRJNA1200128_S_NODE_12561_length_235_cov_1.468750_g12452_i0 PRJNA1200128 12561 235 1.46875 3.4515625 Castanea mollissima 60419 Plants Plants 65.9 3.71e-12   NR KAF3949630.1 60419 g12452 i0 100 0.382978723404255 30 0 38.3 0 233 144 44 73 KAF3949630.1 hypothetical protein CMV_024525 [Castanea mollissima] diamond 90 65.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Castanea Castanea mollissima
26882897 26882897 PRJNA1200128_S_NODE_49721_length_150_cov_1.757009_g49612_i0 PRJNA1200128 49721 150 1.757009 2.6355135 Taxus chinensis 29808 Plants Plants 43.5 0.00554   NR KAH9322403.1 29808 g49612 i0 58 1 50 11 98 2 148 2 3 43 KAH9322403.1 hypothetical protein KI387_017042 [Taxus chinensis] diamond 150 43.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Taxaceae Taxus Taxus chinensis
27135358 27135358 PRJNA1200128_S_NODE_8922_length_262_cov_2.374429_g8813_i0 PRJNA1200128 8922 262 2.374429 6.22100398 Quercus rubra 3512 Plants Plants 109 2.32e-29   NR KAK4589130.1 3512 g8813 i0 100 0.618320610687023 54 0 61.8 0 262 101 19 72 KAK4589130.1 hypothetical protein RGQ29_019925 [Quercus rubra] diamond 162 109 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Quercus Quercus rubra
28462403 28462403 PRJNA1200128_S_NODE_19206_length_206_cov_1.478528_g19097_i0 PRJNA1200128 19206 206 1.478528 3.04576768 Cryptomeria japonica 3369 Plants Plants 64.3 7.81e-11   NR GLJ22179.1 3369 g19097 i0 83.3 1.03398058252427 36 6 52.4 0 206 99 125 160 GLJ22179.1 hypothetical protein SUGI_0416730 [Cryptomeria japonica] diamond 213 64.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cryptomeria Cryptomeria japonica
28557030 28557030 PRJNA1200128_S_NODE_37947_length_165_cov_1.155738_g37838_i0 PRJNA1200128 37947 165 1.155738 1.9069677 Setaria italica 4555 Plants Plants 42.4 0.0184   NR RCV45198.1 4555 g37838 i0 46.5 0.781818181818182 43 23 78.2 0 28 156 137 179 RCV45198.1 hypothetical protein SETIT_9G434200v2 [Setaria italica] diamond 129 42.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Setaria Setaria italica
28967499 28967499 PRJNA1200128_S_NODE_28488_length_182_cov_1.014388_g28379_i0 PRJNA1200128 28488 182 1.014388 1.84618616 Quercus rubra 3512 Plants Plants 81.6 2.51e-17   NR KAK4607538.1 3512 g28379 i0 100 0.626373626373626 38 0 62.6 0 21 134 165 202 KAK4607538.1 hypothetical protein RGQ29_001401 [Quercus rubra] diamond 114 81.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Quercus Quercus rubra
29093807 29093807 PRJNA1200128_S_NODE_16928_length_214_cov_1.923977_g16819_i0 PRJNA1200128 16928 214 1.923977 4.11731078 Lithocarpus litseifolius 425828 Plants Plants 90.1 1.57e-20   NR KAK9987412.1 425828 g16819 i0 87.5 0.672897196261682 48 6 67.3 0 145 2 10 57 KAK9987412.1 hypothetical protein SO802_032363 [Lithocarpus litseifolius] diamond 144 90.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Lithocarpus Lithocarpus litseifolius
29851567 29851567 PRJNA1200128_S_NODE_19591_length_205_cov_1.160494_g19482_i0 PRJNA1200128 19591 205 1.160494 2.3790127 Quercus rubra 3512 Plants Plants 49.7 6.76e-6   NR KAK4598255.1 3512 g19482 i0 100 0.292682926829268 20 0 29.3 0 205 146 57 76 KAK4598255.1 hypothetical protein RGQ29_015648 [Quercus rubra] diamond 60 49.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Quercus Quercus rubra
29977731 29977731 PRJNA1200128_S_NODE_36051_length_168_cov_1.128000_g35942_i0 PRJNA1200128 36051 168 1.128 1.89504 Cornus florida 4283 Plants Plants 91.3 8.73e-22   NR XP_059664433.1 4283 g35942 i0 72.7 15.3571428571429 55 15 98.2 0 2 166 83 137 XP_059664433.1 uncharacterized protein LOC132310260 [Cornus florida] diamond 2580 91.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cornales Cornaceae Cornus Cornus florida
30420474 30420474 PRJNA1200128_S_NODE_17353_length_212_cov_12.284024_g17244_i0 PRJNA1200128 17353 212 12.284024 26.04213088 Smallanthus sonchifolius 185202 Plants Plants 42.4 0.0343   NR KAI3821849.1 185202 g17244 i0 38.9 0.764150943396226 54 31 73.6 1 4 159 130 183 KAI3821849.1 hypothetical protein L1987_09423 [Smallanthus sonchifolius] diamond 162 42.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Smallanthus Smallanthus sonchifolius
30849721 30849721 PRJNA1200128_S_NODE_10314_length_250_cov_1.816425_g10205_i0 PRJNA1200128 10314 250 1.816425 4.5410625 Musaceae 4637 Plants Plants 49.3 1.83e-4   NR RRT35435.1 4639 g10205 i0 54.3 2.076 46 19 52.8 1 234 103 38 83 RRT35435.1 hypothetical protein B296_00059037 [Ensete ventricosum] diamond 519 49.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Zingiberales Musaceae Ensete Ensete ventricosum
31431391 31431391 PRJNA1200128_S_NODE_23216_length_194_cov_23.549669_g23107_i0 PRJNA1200128 23216 194 23.549669 45.68635786 Rhododendron molle 49168 Plants Plants 43.1 0.0145   NR KAI8537824.1 49168 g23107 i0 42.6 0.72680412371134 47 25 69.6 1 48 182 748 794 KAI8537824.1 hypothetical protein RHMOL_Rhmol09G0053700 [Rhododendron molle] diamond 141 43.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ericales Ericaceae Rhododendron Rhododendron molle
31747629 31747629 PRJNA1200128_S_NODE_15497_length_220_cov_1.327684_g15388_i0 PRJNA1200128 15497 220 1.327684 2.9209048 Quercus rubra 3512 Plants Plants 101 2.3599999999999997e-25   NR KAK4594628.1 3512 g15388 i0 100 0.654545454545455 48 0 65.5 0 2 145 112 159 KAK4594628.1 hypothetical protein RGQ29_018349 [Quercus rubra] diamond 144 101 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Quercus Quercus rubra
31811008 31811008 PRJNA1200128_S_NODE_38637_length_164_cov_1.165289_g38528_i0 PRJNA1200128 38637 164 1.165289 1.91107396 Quercus rubra 3512 Plants Plants 56.6 3.89e-9   NR KAK4581221.1 3512 g38528 i0 75 0.658536585365854 36 8 65.9 1 2 109 10 44 KAK4581221.1 hypothetical protein RGQ29_024765 [Quercus rubra] diamond 108 56.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Quercus Quercus rubra
31811009 31811009 PRJNA1200128_S_NODE_43397_length_157_cov_1.736842_g43288_i0 PRJNA1200128 43397 157 1.736842 2.72684194 Actinidia rufa 165716 Plants Plants 40 0.0232   NR GFS41052.1 165716 g43288 i0 41.2 0.64968152866242 34 20 65 0 109 8 36 69 GFS41052.1 hypothetical protein Acr_00g0071950 [Actinidia rufa] diamond 102 40 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ericales Actinidiaceae Actinidia Actinidia rufa
31874182 31874182 PRJNA1200128_S_NODE_2397_length_426_cov_3.744125_g2289_i0 PRJNA1200128 2397 426 3.744125 15.9499725 Quercus rubra 3512 Plants Plants 178 3.879999999999999e-55   NR KAK4591631.1 3512 g2289 i0 100 1.02816901408451 73 0 51.4 0 2 220 33 105 KAK4591631.1 hypothetical protein RGQ29_016171 [Quercus rubra] diamond 438 178 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Quercus Quercus rubra
32190729 32190729 PRJNA1200128_S_NODE_19218_length_206_cov_1.441718_g19109_i0 PRJNA1200128 19218 206 1.441718 2.96993908 Quercus lobata 97700 Plants Plants 105 1.35e-24   NR XP_030958647.1 97700 g19109 i0 71.4 0.91747572815534 63 18 91.7 0 17 205 300 362 XP_030958647.1 uncharacterized protein LOC115980554 [Quercus lobata] diamond 189 105 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Quercus Quercus lobata
32254270 32254270 PRJNA1200128_S_NODE_21238_length_200_cov_1.496815_g21129_i0 PRJNA1200128 21238 200 1.496815 2.99363 Lithocarpus litseifolius 425828 Plants Plants 139 1.25e-40   NR KAL0004350.1 425828 g21129 i0 95.5 0.99 66 3 99 0 1 198 59 124 KAL0004350.1 hypothetical protein SO802_011911 [Lithocarpus litseifolius] diamond 198 139 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Lithocarpus Lithocarpus litseifolius
32285900 32285900 PRJNA1200128_S_NODE_4459_length_329_cov_2.202797_g4350_i0 PRJNA1200128 4459 329 2.202797 7.24720213 Quercus rubra 3512 Plants Plants 85.1 2.93e-18   NR KAK4594626.1 3512 g4350 i0 100 0.364741641337386 40 0 36.5 0 327 208 120 159 KAK4594626.1 hypothetical protein RGQ29_018347 [Quercus rubra] diamond 120 85.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Quercus Quercus rubra
32444066 32444066 PRJNA1200128_S_NODE_11279_length_243_cov_2.525000_g11170_i0 PRJNA1200128 11279 243 2.525 6.13575 Juglans microcarpa x Juglans regia 2249226 Plants Plants 43.1 0.0272   NR XP_041021201.1 2249226 g11170 i0 36.5 0.777777777777778 63 31 66.7 4 197 36 421 483 XP_041021201.1 ETO1-like protein 1 isoform X1 [Juglans microcarpa x Juglans regia] diamond 189 43.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Juglandaceae Juglans Juglans microcarpa x Juglans regia
32696178 32696178 PRJNA1200128_S_NODE_5440_length_307_cov_3.204545_g5331_i0 PRJNA1200128 5440 307 3.204545 9.83795315 Quercus suber 58331 Plants Plants 75.9 1.29e-15   NR KAK7819442.1 58331 g5331 i0 88.4 0.420195439739414 43 5 42 0 306 178 20 62 KAK7819442.1 hypothetical protein CFP56_040279 [Quercus suber] diamond 129 75.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Quercus Quercus suber

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;