RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1200128" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1200128 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28746329 28746329 PRJNA1200128_S_NODE_3467_length_363_cov_2.071875_g3358_i0 PRJNA1200128 3467 363 2.071875 7.52090625 Myxococcota bacterium 2818507 Bacteria Bacteria 121 4.53e-29   NR MEL6195521.1 2818507 g3358 i0 43.8 1 121 68 100 0 1 363 405 525 MEL6195521.1 hypothetical protein [Myxococcota bacterium] diamond 363 121 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
28999286 28999286 PRJNA1200128_S_NODE_26188_length_187_cov_1.305556_g26079_i0 PRJNA1200128 26188 187 1.305556 2.44138972 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 42 0.0335   NR MBW1892295.1 2026735 g26079 i0 46.9 0.513368983957219 32 17 51.3 0 92 187 296 327 MBW1892295.1 HD domain-containing protein [Deltaproteobacteria bacterium] diamond 96 42 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;