contig_metadata
12 rows where analysis = "diamond", bioproject = "PRJNA1200128" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26755860 | 26755860 | PRJNA1200128_S_NODE_11001_length_245_cov_1.787129_g10892_i0 | PRJNA1200128 | 11001 | 245 | 1.787129 | 4.37846605 | Lentisphaeria bacterium | 2053569 | Bacteria | Bacteria | 43.5 | 0.0199 | NR | MCJ8328656.1 | 2053569 | g10892 | i0 | 37.5 | 1.37142857142857 | 56 | 34 | 67.3 | 1 | 232 | 68 | 38 | 93 | MCJ8328656.1 amidohydrolase family protein [Lentisphaeria bacterium] | diamond | 336 | 43.5 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Lentisphaeria bacterium | ||||
| 27388830 | 27388830 | PRJNA1200128_S_NODE_33103_length_173_cov_1.084615_g32994_i0 | PRJNA1200128 | 33103 | 173 | 1.084615 | 1.87638395 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 40.8 | 0.0432 | NR | PYL54605.1 | 2026799 | g32994 | i0 | 44.4 | 0.780346820809249 | 45 | 24 | 76.3 | 1 | 1 | 132 | 26 | 70 | PYL54605.1 MAG: hypothetical protein DMF29_06015 [Verrucomicrobiota bacterium] | diamond | 135 | 40.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27514948 | 27514948 | PRJNA1200128_S_NODE_28963_length_181_cov_1.021739_g28854_i0 | PRJNA1200128 | 28963 | 181 | 1.021739 | 1.84934759 | Pelagicoccus sp. SDUM812 | 2921790 | Bacteria | Bacteria | 42.7 | 0.0161 | NR | WP_309019849.1 | 3041267 | g28854 | i0 | 39.2 | 0.845303867403315 | 51 | 31 | 84.5 | 0 | 6 | 158 | 34 | 84 | WP_309019849.1 CehA/McbA family metallohydrolase [Pelagicoccus sp. SDUM812003] | diamond | 153 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Pelagicoccaceae | Pelagicoccus | Pelagicoccus sp. SDUM812003 | |
| 28177749 | 28177749 | PRJNA1200128_S_NODE_23546_length_194_cov_0.933775_g23437_i0 | PRJNA1200128 | 23546 | 194 | 0.933775 | 1.8115235 | Sedimentisphaerales bacterium | 2813034 | Bacteria | Bacteria | 44.7 | 0.00399 | NR | MBN1796766.1 | 2813034 | g23437 | i0 | 38.2 | 0.850515463917526 | 55 | 25 | 71.1 | 1 | 161 | 24 | 31 | 85 | MBN1796766.1 AmmeMemoRadiSam system radical SAM enzyme [Sedimentisphaerales bacterium] | diamond | 165 | 44.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Sedimentisphaerales | Sedimentisphaerales bacterium | |||
| 28746331 | 28746331 | PRJNA1200128_S_NODE_39887_length_162_cov_1.184874_g39778_i0 | PRJNA1200128 | 39887 | 162 | 1.184874 | 1.91949588 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 41.6 | 0.0311 | NR | MFC1737531.1 | 2026780 | g39778 | i0 | 40.9 | 0.814814814814815 | 44 | 26 | 81.5 | 0 | 140 | 9 | 5 | 48 | MFC1737531.1 PAC2 family protein [Planctomycetota bacterium] | diamond | 132 | 41.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 29504013 | 29504013 | PRJNA1200128_S_NODE_48910_length_151_cov_0.944444_g48801_i0 | PRJNA1200128 | 48910 | 151 | 0.944444 | 1.42611044 | Candidatus Brocadiia bacterium | 2517210 | Bacteria | Bacteria | 43.1 | 0.00786 | NR | MFO7956648.1 | 2517210 | g48801 | i0 | 40.4 | 0.933774834437086 | 47 | 28 | 93.4 | 0 | 4 | 144 | 85 | 131 | MFO7956648.1 divalent metal cation transporter [Candidatus Brocadiia bacterium] | diamond | 141 | 43.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Candidatus Brocadiia | Candidatus Brocadiia bacterium | ||||
| 29788105 | 29788105 | PRJNA1200128_S_NODE_10771_length_247_cov_0.867647_g10662_i0 | PRJNA1200128 | 10771 | 247 | 0.867647 | 2.14308809 | Kiritimatiellia bacterium | 2212473 | Bacteria | Bacteria | 43.1 | 0.0268 | NR | MDZ4198075.1 | 2212473 | g10662 | i0 | 40 | 0.668016194331984 | 55 | 30 | 65.6 | 2 | 69 | 230 | 149 | 201 | MDZ4198075.1 Gfo/Idh/MocA family oxidoreductase [Kiritimatiellia bacterium] | diamond | 165 | 43.1 | 1 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellia | Kiritimatiellia bacterium | ||||
| 29914802 | 29914802 | PRJNA1200128_S_NODE_8671_length_264_cov_7.723982_g8562_i0 | PRJNA1200128 | 8671 | 264 | 7.723982 | 20.39131248 | Opitutia bacterium | 2026771 | Bacteria | Bacteria | 43.9 | 0.0189 | NR | MBI5425267.1 | 2026771 | g8562 | i0 | 39.7 | 1.97727272727273 | 58 | 29 | 62.5 | 2 | 203 | 39 | 299 | 353 | MBI5425267.1 glycoside hydrolase family 2 [Opitutia bacterium] | diamond | 522 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutia bacterium | ||||
| 31558159 | 31558159 | PRJNA1200128_S_NODE_14656_length_224_cov_1.165746_g14547_i0 | PRJNA1200128 | 14656 | 224 | 1.165746 | 2.61127104 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 42.4 | 0.0394 | NR | MDX1951866.1 | 2026799 | g14547 | i0 | 34.8 | 0.616071428571429 | 46 | 30 | 61.6 | 0 | 148 | 11 | 226 | 271 | MDX1951866.1 POTRA domain-containing protein [Verrucomicrobiota bacterium] | diamond | 138 | 42.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31747631 | 31747631 | PRJNA1200128_S_NODE_17477_length_212_cov_1.946746_g17368_i0 | PRJNA1200128 | 17477 | 212 | 1.946746 | 4.12710152 | Candidatus Omnitrophota bacterium | 2035772 | Bacteria | Bacteria | 43.1 | 0.0189 | NR | MBP7216218.1 | 2035772 | g17368 | i0 | 35.7 | 0.792452830188679 | 56 | 36 | 79.2 | 0 | 191 | 24 | 3592 | 3647 | MBP7216218.1 methyltransferase domain-containing protein [Candidatus Omnitrophota bacterium] | diamond | 168 | 43.1 | 1 | Bacteria | PVC group | Pseudomonadati | Candidatus Omnitrophota | Candidatus Omnitrophota bacterium | |||||
| 32570609 | 32570609 | PRJNA1200128_S_NODE_8079_length_270_cov_3.070485_g7970_i0 | PRJNA1200128 | 8079 | 270 | 3.070485 | 8.2903095 | Prosthecobacter sp. | 1965333 | Bacteria | Bacteria | 46.2 | 0.0031 | NR | WP_395745445.1 | 1965333 | g7970 | i0 | 39.7 | 0.7 | 63 | 30 | 61.1 | 2 | 3 | 167 | 163 | 225 | WP_395745445.1 O-antigen ligase family protein [Prosthecobacter sp.] | diamond | 189 | 46.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter sp. | |
| 32759242 | 32759242 | PRJNA1200128_S_NODE_24140_length_192_cov_1.496644_g24031_i0 | PRJNA1200128 | 24140 | 192 | 1.496644 | 2.87355648 | Pirellula sp. | 117 | Bacteria | Bacteria | 42.4 | 0.0256 | NR | MCE2753667.1 | 117 | g24031 | i0 | 45.2 | 0.65625 | 42 | 23 | 65.6 | 0 | 32 | 157 | 356 | 397 | MCE2753667.1 ammonium transporter [Pirellula sp.] | diamond | 126 | 42.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Pirellula | Pirellula sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;