RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1199893" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1199893 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2877631 2877631 PRJNA1199893_P_NODE_16243_length_245_cov_0.895349_g16168_i0 PRJNA1199893 16243 245 0.895349 2.19360505 Philodinidae 44580 Rotifera other_Eukaryota 125 4.58e-33   NR AFQ96975.1 104788 g16168 i0 83.3 1.89795918367347 78 13 95.5 0 3 236 11 88 AFQ96975.1 NADH dehydrogenase subunit 1, partial [Macrotrachela quadricornifera] diamond 465 126 0.992063492063492 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera
28399015 28399015 PRJNA1199893_P_NODE_16926_length_243_cov_0.905882_g16851_i0 PRJNA1199893 16926 243 0.905882 2.20129326 Adineta steineri 433720 Rotifera other_Eukaryota 44.3 0.0105   NR CAF1524545.1 433720 g16851 i0 46.3 1.95061728395062 41 22 50.6 0 26 148 177 217 CAF1524545.1 unnamed protein product [Adineta steineri] diamond 474 44.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;