contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA1199893" and tax_kingdom = "Pseudomonadati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6704578 | 6704578 | PRJNA1199893_P_NODE_2106_length_659_cov_21.923208_g2033_i0 | PRJNA1199893 | 2106 | 659 | 21.923208 | 144.47394072 | Vibrio vulnificus | 672 | Bacteria | Bacteria | 72.4 | 8.06e-13 | NR | WP_224642647.1 | 672 | g2033 | i0 | 54.4 | 0.359635811836115 | 79 | 31 | 33.7 | 3 | 395 | 174 | 5 | 83 | WP_224642647.1 hypothetical protein, partial [Vibrio vulnificus] | diamond | 237 | 72.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio vulnificus | ||
| 27135357 | 27135357 | PRJNA1199893_P_NODE_14222_length_251_cov_0.865169_g14147_i0 | PRJNA1199893 | 14222 | 251 | 0.865169 | 2.17157419 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 42.7 | 0.0404 | NR | RPI26303.1 | 1978231 | g14147 | i0 | 40 | 0.717131474103586 | 60 | 30 | 69.3 | 2 | 31 | 204 | 96 | 151 | RPI26303.1 MAG: GGDEF domain-containing protein [Acidobacteriota bacterium] | diamond | 180 | 42.7 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 28525478 | 28525478 | PRJNA1199893_P_NODE_8727_length_323_cov_1.232000_g8652_i0 | PRJNA1199893 | 8727 | 323 | 1.232 | 3.97936 | Mariprofundaceae bacterium | 2306050 | Bacteria | Bacteria | 97.1 | 2.64e-21 | NR | HKI62304.1 | 2306050 | g8652 | i0 | 65.6 | 0.56656346749226 | 61 | 21 | 56.7 | 0 | 321 | 139 | 303 | 363 | HKI62304.1 hypothetical protein [Mariprofundaceae bacterium] | diamond | 183 | 97.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Candidatius Mariprofundia | Mariprofundales | Mariprofundaceae | Mariprofundaceae bacterium | |||
| 29807039 | 29807039 | PRJNA1199893_P_NODE_11171_length_286_cov_2.032864_g11096_i0 | PRJNA1199893 | 11171 | 286 | 2.032864 | 5.81399104 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 157 | 3.12e-46 | NR | WP_317869804.1 | 573 | g11096 | i0 | 88.8 | 1.87762237762238 | 89 | 9 | 93.4 | 1 | 19 | 285 | 1 | 88 | WP_317869804.1 Kunitz family serine protease inhibitor, partial [Klebsiella pneumoniae] | diamond | 537 | 157 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 30040968 | 30040968 | PRJNA1199893_P_NODE_15231_length_248_cov_0.880000_g15156_i0 | PRJNA1199893 | 15231 | 248 | 0.88 | 2.1824 | Arenibacter lacus | 2608629 | Bacteria | Bacteria | 41.6 | 0.0478 | NR | WP_150452469.1 | 2608629 | g15156 | i0 | 33.9 | 0.67741935483871 | 56 | 36 | 66.5 | 1 | 239 | 75 | 47 | 102 | WP_150452469.1 VOC family protein [Arenibacter lacus] | diamond | 168 | 41.6 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Arenibacter | Arenibacter lacus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;