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contig_metadata

22 rows where analysis = "diamond", bioproject = "PRJNA1199330" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 22 ✖

tax_clade 1

bioproject 1

  • PRJNA1199330 · 22 ✖

analysis 1

  • diamond · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6703029 6703029 PRJNA1199330_P_NODE_17026_length_495_cov_3.023697_g16335_i0 PRJNA1199330 17026 495 3.023697 14.96730015 archaeon 1906665 Archaea Archaea 102 2.25e-23   NR RYH18247.1 1906665 g16335 i0 41.8 0.884848484848485 146 74 82.4 4 492 85 90 234 RYH18247.1 MAG: glutathione S-transferase family protein [archaeon] diamond 438 102 1 Archaea               archaeon
9254163 9254163 PRJNA1199330_P_NODE_86128_length_267_cov_1.360825_g85429_i0 PRJNA1199330 86128 267 1.360825 3.63340275 Haloparvum sedimenti 1678448 Archaea Archaea 176 1.2899999999999997e-54   NR WP_058366244.1 1678448 g85429 i0 100 0.98876404494382 88 0 98.9 0 2 265 55 142 WP_058366244.1 DUF7112 family protein [Haloparvum sedimenti] diamond 264 176 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloparvum Haloparvum sedimenti
24551250 24551250 PRJNA1199330_P_NODE_122680_length_227_cov_2.831169_g121981_i0 PRJNA1199330 122680 227 2.831169 6.42675363 Haloparvum sedimenti 1678448 Archaea Archaea 155 9.15e-45   NR WP_058367199.1 1678448 g121981 i0 97.3 0.991189427312775 75 2 99.1 0 1 225 168 242 WP_058367199.1 alpha/beta fold hydrolase [Haloparvum sedimenti] diamond 225 155 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloparvum Haloparvum sedimenti
26819574 26819574 PRJNA1199330_P_NODE_8361_length_728_cov_2.538931_g7736_i0 PRJNA1199330 8361 728 2.538931 18.48341768 archaeon 1906665 Archaea Archaea 159 3.05e-44   NR RYH18247.1 1906665 g7736 i0 40.4 0.918956043956044 223 119 87.4 4 20 655 4 223 RYH18247.1 MAG: glutathione S-transferase family protein [archaeon] diamond 669 159 1 Archaea               archaeon
26851273 26851273 PRJNA1199330_P_NODE_58281_length_292_cov_1.424658_g57582_i0 PRJNA1199330 58281 292 1.424658 4.16000136 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 122 2.1999999999999994e-33   NR MDF2783317.1 2169593 g57582 i0 96.6 1.21232876712329 59 2 60.6 0 3 179 93 151 MDF2783317.1 Flavin nucleotide binding protein [Nitrososphaeraceae archaeon] diamond 354 122 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
27009165 27009165 PRJNA1199330_P_NODE_71362_length_280_cov_3.014493_g70663_i0 PRJNA1199330 71362 280 3.014493 8.4405804 archaeon 1906665 Archaea Archaea 62 4.61e-9   NR RYH18247.1 1906665 g70663 i0 52.6 0.610714285714286 57 26 61.1 1 88 258 168 223 RYH18247.1 MAG: glutathione S-transferase family protein [archaeon] diamond 171 62 1 Archaea               archaeon
27198738 27198738 PRJNA1199330_P_NODE_19402_length_464_cov_4.457801_g18708_i0 PRJNA1199330 19402 464 4.457801 20.68419664 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 209 6.71e-65   NR MCW4024581.1 2026714 g18708 i0 97.1 0.665948275862069 103 3 66.6 0 462 154 161 263 MCW4024581.1 hypothetical protein [Candidatus Bathyarchaeota archaeon] diamond 309 209 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
27641433 27641433 PRJNA1199330_P_NODE_82744_length_270_cov_1.583756_g82045_i0 PRJNA1199330 82744 270 1.583756 4.2761412 Methanosarcinales archaeon 2250255 Archaea Archaea 81.6 9.43e-16   NR RYE83256.1 2250255 g82045 i0 44.8 0.966666666666667 87 47 96.7 1 270 10 214 299 RYE83256.1 MAG: hypothetical protein EOO65_04255 [Methanosarcinales archaeon] diamond 261 81.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
28304232 28304232 PRJNA1199330_P_NODE_100326_length_253_cov_0.866667_g99627_i0 PRJNA1199330 100326 253 0.866667 2.19266751 Candidatus Altiarchaeota archaeon 2599821 Archaea Archaea 134 1.8e-37   NR MFH1055039.1 2599821 g99627 i0 75.3 1.00790513833992 85 20 99.6 1 1 252 33 117 MFH1055039.1 cob(I)yrinic acid a,c-diamide adenosyltransferase [Candidatus Altiarchaeota archaeon] diamond 255 134 1 Archaea   Nanobdellati Candidatus Altarchaeota         Candidatus Altiarchaeota archaeon
28588609 28588609 PRJNA1199330_P_NODE_29667_length_379_cov_2.895425_g28971_i0 PRJNA1199330 29667 379 2.895425 10.97366075 Methanosarcinales archaeon 2250255 Archaea Archaea 112 2.31e-26   NR RYE83256.1 2250255 g28971 i0 44.3 0.965699208443272 122 67 95.8 1 376 14 171 292 RYE83256.1 MAG: hypothetical protein EOO65_04255 [Methanosarcinales archaeon] diamond 366 112 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
28702154 28702154 PRJNA1199330_P_NODE_15707_length_516_cov_3.162528_g15018_i0 PRJNA1199330 15707 516 3.162528 16.31864448 root 1 Root_unresolved Root_unresolved 45.8 0.0385   NR MDD4162744.1 90426 g15018 i0 53.8 0.540697674418605 39 17 22.1 1 245 132 273 311 MDD4162744.1 PAN domain-containing protein [Methanothrix sp.] diamond 279 46.2 0.991341991341991 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
28828189 28828189 PRJNA1199330_P_NODE_17888_length_483_cov_2.502439_g17194_i0 PRJNA1199330 17888 483 2.502439 12.08678037 root 1 Root_unresolved Root_unresolved 83.6 3.95e-17   NR MBU1976054.1 2026764 g17194 i0 58.3 1.11801242236025 60 25 37.3 0 482 303 81 140 MBU1976054.1 nucleoside 2-deoxyribosyltransferase [Nanoarchaeota archaeon] diamond 540 84 0.995238095238095 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
29049497 29049497 PRJNA1199330_P_NODE_81508_length_271_cov_2.075758_g80809_i0 PRJNA1199330 81508 271 2.075758 5.62530418 root 1 Root_unresolved Root_unresolved 44.7 0.0108   NR MDD4162744.1 90426 g80809 i0 51.2 1.30627306273063 41 19 44.3 1 129 10 437 477 MDD4162744.1 PAN domain-containing protein [Methanothrix sp.] diamond 354 44.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
30028420 30028420 PRJNA1199330_P_NODE_45391_length_312_cov_2.991632_g44692_i0 PRJNA1199330 45391 312 2.991632 9.33389184 Methanobacteriati 3366610 Archaea Archaea 48.9 4.83e-4   NR MAK78478.1 2026739 g44692 i0 73.5 0.692307692307692 34 9 32.7 0 119 18 49 82 MAK78478.1 50S ribosomal protein L32e [Methanobacteriota archaeon] diamond 216 49.3 0.991886409736308 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
30072487 30072487 PRJNA1199330_P_NODE_98532_length_254_cov_3.121547_g97833_i0 PRJNA1199330 98532 254 3.121547 7.92872938 archaeon 1906665 Archaea Archaea 77.8 4.2e-15   NR RYY32887.1 1906665 g97833 i0 53.6 0.992125984251969 84 31 94.5 3 241 2 49 128 RYY32887.1 MAG: hypothetical protein EON62_04840 [archaeon] diamond 252 77.8 1 Archaea               archaeon
30420467 30420467 PRJNA1199330_P_NODE_89993_length_263_cov_2.010526_g89294_i0 PRJNA1199330 89993 263 2.010526 5.28768338 Natronomonas gomsonensis 1046043 Archaea Archaea 42.7 0.0465   NR WP_178915815.1 1046043 g89294 i0 45.2 0.479087452471483 42 23 47.9 0 168 43 438 479 WP_178915815.1 MATE family efflux transporter [Natronomonas gomsonensis] diamond 126 42.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas gomsonensis
30609522 30609522 PRJNA1199330_P_NODE_77373_length_275_cov_1.584158_g76674_i0 PRJNA1199330 77373 275 1.584158 4.3564345 Halomontanus rarus 3034020 Archaea Archaea 69.7 4.91e-12   NR WP_276255520.1 3034020 g76674 i0 75 0.436363636363636 40 10 43.6 0 120 1 1 40 WP_276255520.1 DUF502 domain-containing protein [Halomontanus rarus] diamond 120 69.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Halomontanus Halomontanus rarus
30894207 30894207 PRJNA1199330_P_NODE_62234_length_288_cov_3.381395_g61535_i0 PRJNA1199330 62234 288 3.381395 9.7384176 archaeon 1906665 Archaea Archaea 132 1.6399999999999999e-34   NR NCQ52224.1 1906665 g61535 i0 69.6 0.958333333333333 92 28 95.8 0 279 4 226 317 NCQ52224.1 RNA ligase, T4 RnlA family [archaeon] diamond 276 132 1 Archaea               archaeon
31810973 31810973 PRJNA1199330_P_NODE_29957_length_377_cov_3.694079_g29261_i0 PRJNA1199330 29957 377 3.694079 13.92667783 archaeon 1906665 Archaea Archaea 62 2.87e-8   NR MCQ2821129.1 1906665 g29261 i0 36 0.684350132625995 86 55 68.4 0 1 258 226 311 MCQ2821129.1 protein kinase [archaeon] diamond 258 62 1 Archaea               archaeon
32000785 32000785 PRJNA1199330_P_NODE_70398_length_281_cov_2.307692_g69699_i0 PRJNA1199330 70398 281 2.307692 6.48461452 archaeon 1906665 Archaea Archaea 97.1 2.08e-22   NR RYH18247.1 1906665 g69699 i0 47.3 0.99288256227758 93 49 99.3 0 3 281 32 124 RYH18247.1 MAG: glutathione S-transferase family protein [archaeon] diamond 279 97.1 1 Archaea               archaeon
32317484 32317484 PRJNA1199330_P_NODE_105819_length_249_cov_1.772727_g105120_i0 PRJNA1199330 105819 249 1.772727 4.41409023 Nanobdellota archaeon 2026764 Archaea Archaea 67 1.07e-11   NR MEK6828920.1 2026764 g105120 i0 44 0.903614457831325 75 40 88 2 2 220 72 146 MEK6828920.1 hypothetical protein [Nanoarchaeota archaeon] diamond 225 67 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
32538908 32538908 PRJNA1199330_P_NODE_77259_length_275_cov_2.000000_g76560_i0 PRJNA1199330 77259 275 2 5.5 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 117 6.0399999999999995e-30   NR MCW4024581.1 2026714 g76560 i0 96.6 0.632727272727273 58 2 63.3 0 2 175 206 263 MCW4024581.1 hypothetical protein [Candidatus Bathyarchaeota archaeon] diamond 174 117 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;