RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA1198392" and tax_phylum = "Candidatus Saccharimonadota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA1198392 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26597397 26597397 PRJNA1198392_P_NODE_16761_length_249_cov_1.738636_g16620_i0 PRJNA1198392 16761 249 1.738636 4.32920364 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 58.5 2.97e-8   NR MFA5003891.1 2973664 g16620 i0 43.3 0.807228915662651 67 37 80.7 1 47 247 84 149 MFA5003891.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 201 58.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
26755814 26755814 PRJNA1198392_P_NODE_18661_length_246_cov_0.890173_g18520_i0 PRJNA1198392 18661 246 0.890173 2.18982558 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 110 1.18e-26   NR HSX30426.1 2973664 g18520 i0 62.3 0.939024390243902 77 29 93.9 0 231 1 60 136 HSX30426.1 glycosyltransferase family 4 protein [Candidatus Saccharimonadales bacterium] diamond 231 110 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
27470792 27470792 PRJNA1198392_P_NODE_20763_length_242_cov_0.911243_g20622_i0 PRJNA1198392 20763 242 0.911243 2.20520806 Bacteria 2 Bacteria Bacteria 127 1.9399999999999993e-34   NR MAU34099.1 2026720 g20622 i0 67.5 5.93801652892562 80 26 99.2 0 240 1 7 86 MAU34099.1 glutamine amidotransferase [Candidatus Saccharibacteria bacterium] diamond 1437 127 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27862100 27862100 PRJNA1198392_P_NODE_21425_length_241_cov_0.916667_g21284_i0 PRJNA1198392 21425 241 0.916667 2.20916747 Candidatus Saccharibacteria bacterium 32-5 1970481 Bacteria Bacteria 141 1.9999999999999997e-37   NR OYX53895.1 1970481 g21284 i0 75.9 0.983402489626556 79 19 98.3 0 239 3 176 254 OYX53895.1 MAG: hypothetical protein B7Y92_01145 [Candidatus Saccharibacteria bacterium 32-50-13] diamond 237 141 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-50-13
29629995 29629995 PRJNA1198392_P_NODE_9110_length_286_cov_1.981221_g8969_i0 PRJNA1198392 9110 286 1.981221 5.66629206 Candidatus Microsaccharimonas sp. 3069365 Bacteria Bacteria 66.2 2.63e-10   NR HWT55651.1 3069365 g8969 i0 57.6 0.618881118881119 59 25 61.9 0 3 179 278 336 HWT55651.1 hypothetical protein [Candidatus Microsaccharimonas sp.] diamond 177 66.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Microsaccharimonas Candidatus Microsaccharimonas sp.
30514856 30514856 PRJNA1198392_P_NODE_20133_length_243_cov_0.905882_g19992_i0 PRJNA1198392 20133 243 0.905882 2.20129326 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 106 6.15e-25   NR MBB1557816.1 2026720 g19992 i0 100 0.716049382716049 58 0 71.6 0 1 174 145 202 MBB1557816.1 CHAP domain-containing protein [Candidatus Saccharibacteria bacterium] diamond 174 106 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;