RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1198392" and tax_kingdom = "Nanobdellati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Nanobdellati · 4 ✖

bioproject 1

  • PRJNA1198392 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6146626 6146626 PRJNA1198392_P_NODE_9325_length_285_cov_2.018868_g9184_i0 PRJNA1198392 9325 285 2.018868 5.7537738 Candidatus Micrarchaeaceae archaeon 2953041 Archaea Archaea 154 5.249999999999998e-41   NR MEM3247236.1 2953041 g9184 i0 97.6 1.72631578947368 82 2 86.3 0 248 3 86 167 MEM3247236.1 hypothetical protein [Candidatus Micrarchaeaceae archaeon] diamond 492 154 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia Candidatus Micrarchaeales Candidatus Micrarchaeaceae   Candidatus Micrarchaeaceae archaeon
26692633 26692633 PRJNA1198392_P_NODE_6821_length_311_cov_1.861345_g6680_i0 PRJNA1198392 6821 311 1.861345 5.78878295 Candidatus Micrarchaeaceae archaeon 2953041 Archaea Archaea 196 8.86e-59   NR MEM3247439.1 2953041 g6680 i0 100 0.993569131832797 103 0 99.4 0 2 310 93 195 MEM3247439.1 AAA family ATPase [Candidatus Micrarchaeaceae archaeon] diamond 309 196 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia Candidatus Micrarchaeales Candidatus Micrarchaeaceae   Candidatus Micrarchaeaceae archaeon
32349049 32349049 PRJNA1198392_P_NODE_4479_length_369_cov_1.273649_g4338_i0 PRJNA1198392 4479 369 1.273649 4.69976481 Candidatus Micrarchaeaceae archaeon 2953041 Archaea Archaea 202 3.91e-58   NR MEM3247234.1 2953041 g4338 i0 92.8 0.902439024390244 111 8 90.2 0 333 1 1 111 MEM3247234.1 hypothetical protein [Candidatus Micrarchaeaceae archaeon] diamond 333 202 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia Candidatus Micrarchaeales Candidatus Micrarchaeaceae   Candidatus Micrarchaeaceae archaeon
32538877 32538877 PRJNA1198392_P_NODE_2559_length_465_cov_1.033163_g2418_i0 PRJNA1198392 2559 465 1.033163 4.80420795 Candidatus Micrarchaeaceae archaeon 2953041 Archaea Archaea 308 1.4999999999999999e-96   NR MEM3247236.1 2953041 g2418 i0 97.4 0.993548387096774 154 4 99.4 0 2 463 654 807 MEM3247236.1 hypothetical protein [Candidatus Micrarchaeaceae archaeon] diamond 462 308 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia Candidatus Micrarchaeales Candidatus Micrarchaeaceae   Candidatus Micrarchaeaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;