RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1198392" and tax_kingdom = "Heunggongvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 4 ✖

bioproject 1

  • PRJNA1198392 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27672926 27672926 PRJNA1198392_P_NODE_18504_length_246_cov_0.890173_g18363_i0 PRJNA1198392 18504 246 0.890173 2.18982558 Vibrio phage Va1 2508852 Viruses Viruses 112 8.090000000000001e-27   NR QAU04482.1 2508852 g18363 i0 70.7 1 82 23 98.8 1 244 2 295 376 QAU04482.1 putative DNA polymerase [Vibrio phage Va1] diamond 246 112 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Vibrio phage Va1
30357407 30357407 PRJNA1198392_P_NODE_17392_length_248_cov_1.348571_g17251_i0 PRJNA1198392 17392 248 1.348571 3.34445608 uncultured Caudovirales phage 2100421 Viruses Viruses 52 2.14e-5   NR CAB4143662.1 2100421 g17251 i0 50.7 0.810483870967742 67 25 81 2 2 202 293 351 CAB4143662.1 hypothetical protein UFOVP450_193 [uncultured Caudovirales phage] diamond 201 52 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
31463201 31463201 PRJNA1198392_P_NODE_3356_length_415_cov_0.900585_g3215_i0 PRJNA1198392 3356 415 0.900585 3.73742775 Caudoviricetes sp. 2832643 Viruses Viruses 102 3.86e-24   NR DAM72212.1 2832643 g3215 i0 45 1.87228915662651 129 66 90.4 3 38 412 29 156 DAM72212.1 MAG TPA: HNHc [Caudoviricetes sp.] diamond 777 102 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
32601793 32601793 PRJNA1198392_P_NODE_3700_length_398_cov_1.006154_g3559_i0 PRJNA1198392 3700 398 1.006154 4.00449292 Caudoviricetes sp. 2832643 Viruses Viruses 195 8.039999999999999e-60   NR QTP16066.1 2832643 g3559 i0 68.2 5.83417085427136 129 41 97.2 0 396 10 123 251 QTP16066.1 terminase large subunit TerL, partial [Caudoviricetes sp.] diamond 2322 195 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;