RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1197996" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1197996 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27799237 27799237 PRJNA1197996_S_NODE_11864_length_317_cov_1.073770_g11810_i0 PRJNA1197996 11864 317 1.07377 3.4038509 Ageratum virus 2 2992867 Viruses Viruses 186 1.01e-54   NR WCH76242.1 2992867 g11810 i0 79.6 0.974763406940063 103 21 97.5 0 310 2 306 408 WCH76242.1 aphid transmission protein [Ageratum virus 2] diamond 309 186 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Enamovirus Enamovirus AGV
32254207 32254207 PRJNA1197996_S_NODE_11198_length_323_cov_0.924000_g11144_i0 PRJNA1197996 11198 323 0.924 2.98452 Ageratum virus 2 2992867 Viruses Viruses 194 8.7e-55   NR WCH76245.1 2992867 g11144 i0 84.1 0.993808049535604 107 17 99.4 0 323 3 798 904 WCH76245.1 P1-P2 fusion protein [Ageratum virus 2] diamond 321 194 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Enamovirus Enamovirus AGV

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;