contig_metadata
8 rows where analysis = "diamond", bioproject = "PRJNA1197996" and tax_phylum = "Bacteroidota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 323931 | 323931 | PRJNA1197996_S_NODE_1681_length_594_cov_3.410749_g1633_i0 | PRJNA1197996 | 1681 | 594 | 3.410749 | 20.25984906 | Sphingobacteriales bacterium | 2044944 | Bacteria | Bacteria | 63.2 | 4.93e-9 | NR | NLJ07050.1 | 2044944 | g1633 | i0 | 39.8 | 0.944444444444444 | 93 | 55 | 46.5 | 1 | 103 | 378 | 22 | 114 | NLJ07050.1 30S ribosomal protein S13 [Sphingobacteriales bacterium] | diamond | 561 | 63.2 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriales bacterium | |||
| 26692623 | 26692623 | PRJNA1197996_S_NODE_20741_length_263_cov_1.463158_g20687_i0 | PRJNA1197996 | 20741 | 263 | 1.463158 | 3.84810554 | Bacteroidota bacterium | 1898104 | Bacteria | Bacteria | 42.4 | 0.0234 | NR | HWP83456.1 | 1898104 | g20687 | i0 | 30.8 | 0.741444866920152 | 65 | 41 | 74.1 | 1 | 230 | 36 | 9 | 69 | HWP83456.1 response regulator [Bacteroidota bacterium] | diamond | 195 | 42.4 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidota bacterium | |||||
| 26933291 | 26933291 | PRJNA1197996_S_NODE_662_length_821_cov_4.494652_g627_i0 | PRJNA1197996 | 662 | 821 | 4.494652 | 36.90109292 | Bacteria | 2 | Bacteria | Bacteria | 110 | 3.07e-26 | NR | HNF30084.1 | 1869212 | g627 | i0 | 52.3 | 0.811205846528624 | 111 | 50 | 39.5 | 1 | 482 | 159 | 1 | 111 | HNF30084.1 50S ribosomal protein L14 [Chitinophagaceae bacterium] | diamond | 666 | 110 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Chitinophagaceae bacterium | ||
| 27420456 | 27420456 | PRJNA1197996_S_NODE_27023_length_244_cov_0.900585_g26969_i0 | PRJNA1197996 | 27023 | 244 | 0.900585 | 2.1974274 | Cyclobacteriaceae bacterium | 2099675 | Bacteria | Bacteria | 94.4 | 1.8399999999999998e-23 | NR | HEV8514473.1 | 2099675 | g26969 | i0 | 86.2 | 4.97950819672131 | 58 | 8 | 71.3 | 0 | 70 | 243 | 1 | 58 | HEV8514473.1 50S ribosomal protein L29 [Cyclobacteriaceae bacterium] | diamond | 1215 | 94.4 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Cyclobacteriaceae | Cyclobacteriaceae bacterium | ||
| 29081016 | 29081016 | PRJNA1197996_S_NODE_7968_length_358_cov_7.838596_g7914_i0 | PRJNA1197996 | 7968 | 358 | 7.838596 | 28.06217368 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 62.8 | 1.94e-9 | NR | MCR9066919.1 | 2053541 | g7914 | i0 | 69 | 1.27374301675978 | 42 | 13 | 35.2 | 0 | 1 | 126 | 108 | 149 | MCR9066919.1 Hsp20/alpha crystallin family protein [Cytophagales bacterium] | diamond | 456 | 62.8 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Cytophagales bacterium | |||
| 30957380 | 30957380 | PRJNA1197996_S_NODE_11854_length_317_cov_1.225410_g11800_i0 | PRJNA1197996 | 11854 | 317 | 1.22541 | 3.8845497 | Cytophagales bacterium | 2053541 | Bacteria | Bacteria | 78.2 | 1.36e-15 | NR | MCR9066919.1 | 2053541 | g11800 | i0 | 57.6 | 0.624605678233438 | 66 | 28 | 62.5 | 0 | 317 | 120 | 82 | 147 | MCR9066919.1 Hsp20/alpha crystallin family protein [Cytophagales bacterium] | diamond | 198 | 78.2 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Cytophagales bacterium | |||
| 32000743 | 32000743 | PRJNA1197996_S_NODE_2078_length_550_cov_3.161426_g2028_i0 | PRJNA1197996 | 2078 | 550 | 3.161426 | 17.387843 | Chitinophagaceae bacterium | 1869212 | Bacteria | Bacteria | 60.1 | 7.14e-7 | NR | HNF29017.1 | 1869212 | g2028 | i0 | 27.8 | 0.981818181818182 | 180 | 111 | 91.1 | 4 | 7 | 507 | 501 | 674 | HNF29017.1 NADH-quinone oxidoreductase subunit NuoG [Chitinophagaceae bacterium] | diamond | 540 | 60.1 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Chitinophagaceae bacterium | ||
| 32759188 | 32759188 | PRJNA1197996_S_NODE_9880_length_335_cov_4.278626_g9826_i0 | PRJNA1197996 | 9880 | 335 | 4.278626 | 14.3333971 | Bacteroidales bacterium | 2030927 | Bacteria | Bacteria | 42 | 0.0277 | NR | MDR1974868.1 | 2030927 | g9826 | i0 | 45.2 | 0.277611940298507 | 31 | 17 | 27.8 | 0 | 28 | 120 | 47 | 77 | MDR1974868.1 DUF3791 domain-containing protein [Bacteroidales bacterium] | diamond | 93 | 42 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidales bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;