RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1197996" and tax_clade = "PVC group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA1197996 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26945851 26945851 PRJNA1197996_S_NODE_11162_length_323_cov_1.368000_g11108_i0 PRJNA1197996 11162 323 1.368 4.41864 Planctomycetes bacterium GWF2_5 2026780 Bacteria Bacteria 44.7 0.0154   NR OHB55713.1 1801959 g11108 i0 40 0.464396284829721 50 25 41.8 1 97 231 70 119 OHB55713.1 MAG: hypothetical protein A2Y07_11275 [Planctomycetes bacterium GWF2_50_10] diamond 150 44.7 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetes bacterium GWF2_50_10
30704373 30704373 PRJNA1197996_S_NODE_24974_length_248_cov_0.880000_g24920_i0 PRJNA1197996 24974 248 0.88 2.1824 Pirellulales bacterium 2715253 Bacteria Bacteria 44.3 0.0112   NR MFV2070161.1 2715253 g24920 i0 39.4 0.858870967741935 71 34 85.9 2 20 232 523 584 MFV2070161.1 IS1634 family transposase [Pirellulales bacterium] diamond 213 44.3 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales     Pirellulales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;