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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1196438" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 4 ✖

bioproject 1

  • PRJNA1196438 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28020199 28020199 PRJNA1196438_P_NODE_54185_length_267_cov_1.515464_g53758_i0 PRJNA1196438 54185 267 1.515464 4.04628888 Natronomonas sp. LN261 2750669 Archaea Archaea 162 1.8e-44   NR WP_181692080.1 2750669 g53758 i0 89.8 0.98876404494382 88 9 98.9 0 2 265 245 332 WP_181692080.1 twin-arginine translocase subunit TatC [Natronomonas sp. LN261] diamond 264 162 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas sp. LN261
28114617 28114617 PRJNA1196438_P_NODE_51205_length_271_cov_2.262626_g50778_i0 PRJNA1196438 51205 271 2.262626 6.13171646 Methanothrix sp. 90426 Archaea Archaea 52.4 4.67e-6   NR MDD1748404.1 90426 g50778 i0 62.5 0.44280442804428 40 15 44.3 0 145 264 1 40 MDD1748404.1 hypothetical protein [Methanothrix sp.] diamond 120 52.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
30294062 30294062 PRJNA1196438_P_NODE_52512_length_269_cov_2.673469_g52085_i0 PRJNA1196438 52512 269 2.673469 7.19163161 Natronomonas sp. LN261 2750669 Archaea Archaea 167 3.86e-50   NR WP_181692800.1 2750669 g52085 i0 89.3 0.936802973977695 84 9 93.7 0 267 16 144 227 WP_181692800.1 SCO family protein [Natronomonas sp. LN261] diamond 252 167 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas sp. LN261
32317466 32317466 PRJNA1196438_P_NODE_9679_length_339_cov_2.244361_g9254_i0 PRJNA1196438 9679 339 2.244361 7.60838379 Methanofastidiosum sp. 2666341 Archaea Archaea 160 5.49e-45   NR MBP6932984.1 2666341 g9254 i0 73.2 3.93805309734513 112 30 99.1 0 338 3 10 121 MBP6932984.1 MobA/MobL family protein [Methanofastidiosum sp.] diamond 1335 160 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia Candidatus Methanofastidiosales Candidatus Methanofastidiosaceae Candidatus Methanofastidiosum Methanofastidiosum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;