RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1196384" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1196384 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27009054 27009054 PRJNA1196384_S_NODE_5782_length_172_cov_1.429630_g5718_i0 PRJNA1196384 5782 172 1.42963 2.4589636 Bigelowiella natans 227086 SAR_Eukaryotes SAR_Eukaryotes 108 5.670000000000001e-29   NR AAT09085.1 227086 g5718 i0 89.5 1.98837209302326 57 6 99.4 0 171 1 53 109 AAT09085.1 ubiquitin conjugating enzyme [Bigelowiella natans] diamond 342 108 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Bigelowiella Bigelowiella natans
32095572 32095572 PRJNA1196384_S_NODE_4558_length_188_cov_2.158940_g4494_i0 PRJNA1196384 4558 188 2.15894 4.0588072 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 97.1 2.15e-22   NR MES1913008.1 1215613 g4494 i0 71 0.98936170212766 62 18 98.9 0 186 1 89 150 MES1913008.1 hypothetical protein [Cercozoa sp. M6MM] diamond 186 97.1 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;