contig_metadata
8 rows where analysis = "diamond", bioproject = "PRJNA1196384" and tax_phylum = "Bacteroidota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15625477 | 15625477 | PRJNA1196384_S_NODE_4553_length_188_cov_2.589404_g4489_i0 | PRJNA1196384 | 4553 | 188 | 2.589404 | 4.86807952 | Prolixibacteraceae bacterium | 2053594 | Bacteria | Bacteria | 92.4 | 4.59e-20 | NR | HPT30421.1 | 2053594 | g4489 | i0 | 91.5 | 6.09574468085106 | 47 | 4 | 75 | 0 | 6 | 146 | 426 | 472 | HPT30421.1 adenosylhomocysteinase [Prolixibacteraceae bacterium] | diamond | 1146 | 92.4 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Marinilabiliales | Prolixibacteraceae | Prolixibacteraceae bacterium | ||
| 26882782 | 26882782 | PRJNA1196384_S_NODE_6341_length_166_cov_1.193798_g6277_i0 | PRJNA1196384 | 6341 | 166 | 1.193798 | 1.98170468 | Cytophagales bacterium | 2053541 | Bacteria | Bacteria | 42 | 0.0252 | NR | HEX8532100.1 | 2053541 | g6277 | i0 | 42.6 | 1.78915662650602 | 54 | 31 | 97.6 | 0 | 1 | 162 | 54 | 107 | HEX8532100.1 DUF1565 domain-containing protein [Cytophagales bacterium] | diamond | 297 | 42 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Cytophagales bacterium | |||
| 29459497 | 29459497 | PRJNA1196384_S_NODE_5390_length_177_cov_1.100000_g5326_i0 | PRJNA1196384 | 5390 | 177 | 1.1 | 1.947 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 90.9 | 1.95e-20 | NR | MBK7147921.1 | 1898104 | g5326 | i0 | 69.5 | 11 | 59 | 18 | 100 | 0 | 177 | 1 | 109 | 167 | MBK7147921.1 3-deoxy-8-phosphooctulonate synthase [Bacteroidota bacterium] | diamond | 1947 | 91.7 | 0.991275899672846 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidota bacterium | |||||
| 30230411 | 30230411 | PRJNA1196384_S_NODE_2812_length_231_cov_2.304124_g2748_i0 | PRJNA1196384 | 2812 | 231 | 2.304124 | 5.32252644 | Bacteroidia bacterium | 2044936 | Bacteria | Bacteria | 50.1 | 8.34e-5 | NR | MCX8113298.1 | 2044936 | g2748 | i0 | 43.1 | 0.753246753246753 | 58 | 30 | 71.4 | 1 | 165 | 1 | 254 | 311 | MCX8113298.1 NAD(P)-binding domain-containing protein [Bacteroidia bacterium] | diamond | 174 | 50.1 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidia bacterium | ||||
| 30230412 | 30230412 | PRJNA1196384_S_NODE_3092_length_221_cov_2.255435_g3028_i0 | PRJNA1196384 | 3092 | 221 | 2.255435 | 4.98451135 | Bacteroidota bacterium | 1898104 | Bacteria | Bacteria | 68.6 | 1.31e-11 | NR | MBS1738818.1 | 1898104 | g3028 | i0 | 52 | 1.01809954751131 | 75 | 33 | 97.7 | 1 | 1 | 216 | 151 | 225 | MBS1738818.1 50S ribosomal protein L2 [Bacteroidota bacterium] | diamond | 225 | 68.6 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidota bacterium | |||||
| 30294030 | 30294030 | PRJNA1196384_S_NODE_812_length_426_cov_3.802057_g748_i0 | PRJNA1196384 | 812 | 426 | 3.802057 | 16.19676282 | Spirosoma utsteinense | 2585773 | Bacteria | Bacteria | 52.4 | 6.82e-5 | NR | WP_186750249.1 | 2585773 | g748 | i0 | 27.7 | 2.70422535211268 | 119 | 71 | 74.6 | 4 | 66 | 383 | 7 | 123 | WP_186750249.1 HNH endonuclease [Spirosoma utsteinense] | diamond | 1152 | 52.4 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Cytophagaceae | Spirosoma | Spirosoma utsteinense | |
| 30799020 | 30799020 | PRJNA1196384_S_NODE_8214_length_152_cov_0.991304_g8150_i0 | PRJNA1196384 | 8214 | 152 | 0.991304 | 1.50678208 | Bacteroidota bacterium | 1898104 | Bacteria | Bacteria | 75.5 | 2.97e-14 | NR | MBL0046497.1 | 1898104 | g8150 | i0 | 72 | 1.97368421052632 | 50 | 14 | 98.7 | 0 | 3 | 152 | 188 | 237 | MBL0046497.1 Glu/Leu/Phe/Val dehydrogenase [Bacteroidota bacterium] | diamond | 300 | 75.5 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidota bacterium | |||||
| 32570491 | 32570491 | PRJNA1196384_S_NODE_6059_length_169_cov_1.007576_g5995_i0 | PRJNA1196384 | 6059 | 169 | 1.007576 | 1.70280344 | Prolixibacteraceae bacterium | 2053594 | Bacteria | Bacteria | 47 | 4.35e-4 | NR | MDA3818470.1 | 2053594 | g5995 | i0 | 46.2 | 0.692307692307692 | 39 | 21 | 69.2 | 0 | 52 | 168 | 286 | 324 | MDA3818470.1 zinc-binding dehydrogenase [Prolixibacteraceae bacterium] | diamond | 117 | 47 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Marinilabiliales | Prolixibacteraceae | Prolixibacteraceae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;