RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1196384" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 2 ✖

bioproject 1

  • PRJNA1196384 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27167104 27167104 PRJNA1196384_S_NODE_6582_length_164_cov_0.921260_g6518_i0 PRJNA1196384 6582 164 0.92126 1.5108664 Candidatus Methanofastidiosia archaeon 2099674 Archaea Archaea 95.9 1.53e-22   NR NYT12920.1 2099674 g6518 i0 88.2 5.61585365853659 51 6 93.3 0 162 10 169 219 NYT12920.1 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [Candidatus Methanofastidiosia archaeon] diamond 921 95.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia       Candidatus Methanofastidiosia archaeon
29188457 29188457 PRJNA1196384_S_NODE_4449_length_190_cov_1.274510_g4385_i0 PRJNA1196384 4449 190 1.27451 2.421569 Natronomonas sp. 2184060 Archaea Archaea 50.1 4.66e-5   NR WP_310677108.1 2184060 g4385 i0 48 0.789473684210526 50 26 78.9 0 170 21 240 289 WP_310677108.1 hypothetical protein [Natronomonas sp.] diamond 150 50.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;