RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1196384" and tax_clade = "Metamonada"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA1196384 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28177638 28177638 PRJNA1196384_S_NODE_6026_length_169_cov_1.621212_g5962_i0 PRJNA1196384 6026 169 1.621212 2.73984828 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 42.4 0.019   NR KAJ5070615.1 1746090 g5962 i0 38 1.72189349112426 50 31 88.8 0 169 20 22 71 KAJ5070615.1 cysteine protease rd19c-related [Anaeramoeba ignava] diamond 291 42.4 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
28828165 28828165 PRJNA1196384_S_NODE_3388_length_213_cov_1.448864_g3324_i0 PRJNA1196384 3388 213 1.448864 3.08608032 root 1 Root_unresolved Root_unresolved 42.4 0.0199   NR XP_067718525.1 2049356 g3324 i0 33.3 1.90140845070423 72 41 98.6 3 1 210 56 122 XP_067718525.1 uncharacterized protein MONOS_18501 [Monocercomonoides exilis] diamond 405 42.4 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
30186127 30186127 PRJNA1196384_S_NODE_2112_length_268_cov_2.116883_g2048_i0 PRJNA1196384 2112 268 2.116883 5.67324644 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 76.3 2e-15   NR KAA6402587.1 222440 g2048 i0 75 5.44029850746269 44 11 49.3 0 171 40 87 130 KAA6402587.1 MAG: putative 40S ribosomal protein S15a [Streblomastix strix] diamond 1458 76.3 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;