contig_metadata
15 rows where analysis = "diamond", bioproject = "PRJNA1195551" and tax_phylum = "Bacteroidota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26629275 | 26629275 | PRJNA1195551_S_NODE_26921_length_195_cov_1.780822_g26568_i0 | PRJNA1195551 | 26921 | 195 | 1.780822 | 3.4726029 | Bacteroidota bacterium | 1898104 | Bacteria | Bacteria | 122 | 1.77e-30 | NR | MFN4892480.1 | 1898104 | g26568 | i0 | 95.3 | 7.87692307692308 | 64 | 3 | 98.5 | 0 | 194 | 3 | 827 | 890 | MFN4892480.1 type I restriction endonuclease subunit R [Bacteroidota bacterium] | diamond | 1536 | 122 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidota bacterium | |||||
| 26851162 | 26851162 | PRJNA1195551_S_NODE_13801_length_261_cov_3.188679_g13448_i0 | PRJNA1195551 | 13801 | 261 | 3.188679 | 8.32245219 | Chryseobacterium viscerum | 1037377 | Bacteria | Bacteria | 102 | 1.64e-24 | NR | WP_103233036.1 | 1037377 | g13448 | i0 | 54.2 | 0.954022988505747 | 83 | 38 | 95.4 | 0 | 2 | 250 | 96 | 178 | WP_103233036.1 HNH endonuclease [Chryseobacterium viscerum] | diamond | 249 | 102 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium viscerum | |
| 27040867 | 27040867 | PRJNA1195551_S_NODE_40242_length_163_cov_0.824561_g39889_i0 | PRJNA1195551 | 40242 | 163 | 0.824561 | 1.34403443 | Aequorivita sp. 6 | 1872390 | Bacteria | Bacteria | 64.7 | 1.43e-11 | NR | WP_185099496.1 | 2760087 | g39889 | i0 | 88.9 | 3.97546012269939 | 36 | 4 | 66.3 | 0 | 144 | 37 | 65 | 100 | WP_185099496.1 40S ribosomal protein S17, partial [Aequorivita sp. 609] | diamond | 648 | 64.7 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Aequorivita | Aequorivita sp. 609 | |
| 27230458 | 27230458 | PRJNA1195551_S_NODE_18083_length_233_cov_8.228261_g17730_i0 | PRJNA1195551 | 18083 | 233 | 8.228261 | 19.17184813 | Sphingobacteriales bacterium | 2044944 | Bacteria | Bacteria | 43.5 | 0.0104 | NR | RYD87703.1 | 2044944 | g17730 | i0 | 89.5 | 0.244635193133047 | 19 | 2 | 24.5 | 0 | 168 | 112 | 150 | 168 | RYD87703.1 MAG: LysR family transcriptional regulator [Sphingobacteriales bacterium] | diamond | 57 | 43.5 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriales bacterium | |||
| 27357083 | 27357083 | PRJNA1195551_S_NODE_14463_length_256_cov_4.415459_g14110_i0 | PRJNA1195551 | 14463 | 256 | 4.415459 | 11.30357504 | Flavobacteriales bacterium | 2021391 | Bacteria | Bacteria | 45.8 | 0.0035 | NR | MBL7956557.1 | 2021391 | g14110 | i0 | 37.1 | 0.8203125 | 70 | 41 | 78.5 | 1 | 26 | 226 | 351 | 420 | MBL7956557.1 hypothetical protein [Flavobacteriales bacterium] | diamond | 210 | 45.8 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriales bacterium | |||
| 27736175 | 27736175 | PRJNA1195551_S_NODE_18484_length_231_cov_4.697802_g18131_i0 | PRJNA1195551 | 18484 | 231 | 4.697802 | 10.85192262 | Bacteroidales bacterium | 2030927 | Bacteria | Bacteria | 42.7 | 0.0313 | NR | MBQ3882713.1 | 2030927 | g18131 | i0 | 31 | 0.922077922077922 | 71 | 48 | 90.9 | 1 | 11 | 220 | 351 | 421 | MBQ3882713.1 hypothetical protein [Bacteroidales bacterium] | diamond | 213 | 42.7 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidales bacterium | |||
| 28367197 | 28367197 | PRJNA1195551_S_NODE_33426_length_176_cov_1.275591_g33073_i0 | PRJNA1195551 | 33426 | 176 | 1.275591 | 2.24504016 | Bacteroidaceae bacterium | 2212467 | Bacteria | Bacteria | 41.2 | 0.0383 | NR | MBR5843814.1 | 2212467 | g33073 | i0 | 33.3 | 0.767045454545455 | 45 | 20 | 76.7 | 1 | 15 | 149 | 68 | 102 | MBR5843814.1 nitroreductase family protein [Bacteroidaceae bacterium] | diamond | 135 | 41.2 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroidaceae bacterium | ||
| 28746201 | 28746201 | PRJNA1195551_S_NODE_19347_length_227_cov_1.460674_g18994_i0 | PRJNA1195551 | 19347 | 227 | 1.460674 | 3.31572998 | Bacteroidota bacterium | 1898104 | Bacteria | Bacteria | 43.9 | 0.0116 | NR | MDQ3100885.1 | 1898104 | g18994 | i0 | 40.8 | 0.647577092511013 | 49 | 26 | 60.8 | 1 | 219 | 82 | 138 | 186 | MDQ3100885.1 hypothetical protein [Bacteroidota bacterium] | diamond | 147 | 43.9 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidota bacterium | |||||
| 29724725 | 29724725 | PRJNA1195551_S_NODE_16870_length_240_cov_9.691099_g16517_i0 | PRJNA1195551 | 16870 | 240 | 9.691099 | 23.2586376 | Bacteroides caecimuris | 1796613 | Bacteria | Bacteria | 143 | 8.34e-41 | NR | WP_255204297.1 | 1796613 | g16517 | i0 | 89.7 | 0.975 | 78 | 8 | 97.5 | 0 | 236 | 3 | 37 | 114 | WP_255204297.1 hypothetical protein [Bacteroides caecimuris] | diamond | 234 | 143 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | Bacteroides caecimuris | |
| 30862309 | 30862309 | PRJNA1195551_S_NODE_27734_length_192_cov_2.545455_g27381_i0 | PRJNA1195551 | 27734 | 192 | 2.545455 | 4.8872736 | Bacteroidaceae bacterium | 2212467 | Bacteria | Bacteria | 112 | 6.77e-27 | NR | MBR5204604.1 | 2212467 | g27381 | i0 | 87.3 | 0.984375 | 63 | 8 | 98.4 | 0 | 190 | 2 | 525 | 587 | MBR5204604.1 serine hydrolase [Bacteroidaceae bacterium] | diamond | 189 | 112 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroidaceae bacterium | ||
| 30925765 | 30925765 | PRJNA1195551_S_NODE_26894_length_195_cov_2.102740_g26541_i0 | PRJNA1195551 | 26894 | 195 | 2.10274 | 4.100343 | Pedobacter sp. | 1411316 | Bacteria | Bacteria | 41.6 | 0.0494 | NR | MDQ8038756.1 | 1411316 | g26541 | i0 | 50 | 0.553846153846154 | 36 | 17 | 53.8 | 1 | 10 | 114 | 4 | 39 | MDQ8038756.1 hypothetical protein [Pedobacter sp.] | diamond | 108 | 41.6 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Pedobacter | Pedobacter sp. | |
| 31368263 | 31368263 | PRJNA1195551_S_NODE_26076_length_198_cov_1.395973_g25723_i0 | PRJNA1195551 | 26076 | 198 | 1.395973 | 2.76402654 | Chryseobacterium sp. 6424 | 2039166 | Bacteria | Bacteria | 61.6 | 2.56e-10 | NR | WP_122028713.1 | 2039166 | g25723 | i0 | 77.3 | 0.666666666666667 | 44 | 9 | 65.2 | 1 | 69 | 197 | 1 | 44 | WP_122028713.1 hypothetical protein [Chryseobacterium sp. 6424] | diamond | 132 | 61.6 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium sp. 6424 | |
| 31905711 | 31905711 | PRJNA1195551_S_NODE_10757_length_287_cov_4.588235_g10404_i0 | PRJNA1195551 | 10757 | 287 | 4.588235 | 13.16823445 | Bacteroidales bacterium | 2030927 | Bacteria | Bacteria | 159 | 1.4099999999999996e-43 | NR | MBO5942039.1 | 2030927 | g10404 | i0 | 96.3 | 0.857142857142857 | 82 | 3 | 85.7 | 0 | 40 | 285 | 1 | 82 | MBO5942039.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Bacteroidales bacterium] | diamond | 246 | 159 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidales bacterium | |||
| 32019670 | 32019670 | PRJNA1195551_S_NODE_25698_length_199_cov_3.120000_g25345_i0 | PRJNA1195551 | 25698 | 199 | 3.12 | 6.2088 | Bacteria | 2 | Bacteria | Bacteria | 53.5 | 1.48e-6 | NR | HEX3023776.1 | 1869212 | g25345 | i0 | 39.4 | 1.98994974874372 | 66 | 40 | 99.5 | 0 | 1 | 198 | 89 | 154 | HEX3023776.1 gluconate 2-dehydrogenase subunit 3 family protein [Chitinophagaceae bacterium] | diamond | 396 | 53.5 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Chitinophagaceae bacterium | ||
| 32063866 | 32063866 | PRJNA1195551_S_NODE_15418_length_250_cov_3.104478_g15065_i0 | PRJNA1195551 | 15418 | 250 | 3.104478 | 7.761195 | Bacteroidales bacterium | 2030927 | Bacteria | Bacteria | 154 | 3.86e-46 | NR | MBR1765981.1 | 2030927 | g15065 | i0 | 85.4 | 4.932 | 82 | 12 | 98.4 | 0 | 5 | 250 | 55 | 136 | MBR1765981.1 DUF1573 domain-containing protein [Bacteroidales bacterium] | diamond | 1233 | 154 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidales bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;