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contig_metadata

23 rows where analysis = "diamond", bioproject = "PRJNA1195551" and tax_phylum = "Actinomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Actinomycetota · 23 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1195551 · 23 ✖

analysis 1

  • diamond · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26851161 26851161 PRJNA1195551_S_NODE_12381_length_272_cov_5.479821_g12028_i0 PRJNA1195551 12381 272 5.479821 14.90511312 Jiangellaceae bacterium 2768363 Bacteria Bacteria 42.7 0.0372   NR HSI92738.1 2768363 g12028 i0 34.9 0.915441176470588 83 39 91.5 3 254 6 115 182 HSI92738.1 DUF559 domain-containing protein [Jiangellaceae bacterium] diamond 249 42.7 1 Bacteria   Bacillati Actinomycetota Actinomycetes Jiangellales Jiangellaceae   Jiangellaceae bacterium
27420379 27420379 PRJNA1195551_S_NODE_16363_length_244_cov_1.066667_g16010_i0 PRJNA1195551 16363 244 1.066667 2.60266748 Pedococcus sp. 2860345 Bacteria Bacteria 45.1 0.00563   NR HEY7718655.1 2860345 g16010 i0 35.4 1.00819672131148 82 40 94.7 3 3 233 203 276 HEY7718655.1 acyltransferase family protein [Pedococcus sp.] diamond 246 45.1 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Intrasporangiaceae Pedococcus Pedococcus sp.
27672859 27672859 PRJNA1195551_S_NODE_20104_length_223_cov_2.586207_g19751_i0 PRJNA1195551 20104 223 2.586207 5.76724161 Microbacterium 33882 Bacteria Bacteria 42.7 0.0212   NR WP_292768637.1 33882 g19751 i0 34.5 1.39910313901345 55 36 74 0 170 6 81 135 WP_292768637.1 MULTISPECIES: biotin transporter BioY [Microbacterium] diamond 312 42.7 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium  
28398902 28398902 PRJNA1195551_S_NODE_23766_length_207_cov_1.037975_g23413_i0 PRJNA1195551 23766 207 1.037975 2.14860825 uncultured Frankineae bacterium 437475 Bacteria Bacteria 114 1.37e-30   NR CAA9350750.1 437475 g23413 i0 83.6 0.971014492753623 67 11 97.1 0 205 5 81 147 CAA9350750.1 MAG: NADH-ubiquinone oxidoreductase chain I [uncultured Frankineae bacterium] diamond 201 114 1 Bacteria   Bacillati Actinomycetota Actinomycetes Frankiales     uncultured Frankineae bacterium
28746204 28746204 PRJNA1195551_S_NODE_35627_length_171_cov_1.278689_g35274_i0 PRJNA1195551 35627 171 1.278689 2.18655819 Kitasatospora kifunensis 58351 Bacteria Bacteria 43.1 0.00961   NR WP_184939329.1 58351 g35274 i0 41.4 1.01754385964912 58 23 87.7 2 6 155 166 220 WP_184939329.1 polysaccharide deacetylase family protein [Kitasatospora kifunensis] diamond 174 43.1 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Kitasatospora Kitasatospora kifunensis
28809041 28809041 PRJNA1195551_S_NODE_38988_length_165_cov_0.896552_g38635_i0 PRJNA1195551 38988 165 0.896552 1.4793108 Cutibacterium avidum 33010 Bacteria Bacteria 58.5 3.25e-8   NR MDU3568470.1 33010 g38635 i0 93.3 0.545454545454545 30 1 54.5 1 1 90 264 292 MDU3568470.1 Na+/H+ antiporter NhaA [Cutibacterium avidum] diamond 90 58.5 1 Bacteria   Bacillati Actinomycetota Actinomycetes Propionibacteriales Propionibacteriaceae Cutibacterium Cutibacterium avidum
29030601 29030601 PRJNA1195551_S_NODE_23928_length_206_cov_2.917197_g23575_i0 PRJNA1195551 23928 206 2.917197 6.00942582 Leucobacter komagatae 55969 Bacteria Bacteria 42.4 0.0318   NR WP_141888704.1 55969 g23575 i0 33.3 0.742718446601942 51 34 74.3 0 26 178 671 721 WP_141888704.1 FtsX-like permease family protein [Leucobacter komagatae] diamond 153 42.4 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Leucobacter Leucobacter komagatae
29333508 29333508 PRJNA1195551_S_NODE_10569_length_289_cov_3.262500_g10216_i0 PRJNA1195551 10569 289 3.2625 9.428625 root 1 Root_unresolved Root_unresolved 58.5 3.45e-8   NR MES9247268.1 1747 g10216 i0 38.4 13.3598615916955 99 54 95.5 2 277 2 22 120 MES9247268.1 hypothetical protein [Cutibacterium acnes] diamond 3861 58.9 0.99320882852292 Bacteria   Bacillati Actinomycetota Actinomycetes Propionibacteriales Propionibacteriaceae Cutibacterium Cutibacterium acnes
29693087 29693087 PRJNA1195551_S_NODE_24890_length_202_cov_3.718954_g24537_i0 PRJNA1195551 24890 202 3.718954 7.51228708 Streptomyces spiralis 66376 Bacteria Bacteria 43.9 0.00775   NR WP_189902841.1 66376 g24537 i0 50 0.623762376237624 42 20 60.9 1 39 161 65 106 WP_189902841.1 type II secretion system F family protein [Streptomyces spiralis] diamond 126 43.9 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces spiralis
29819522 29819522 PRJNA1195551_S_NODE_34271_length_174_cov_1.664000_g33918_i0 PRJNA1195551 34271 174 1.664 2.89536 Actinomycetota bacterium 2900548 Bacteria Bacteria 39.7 0.0485   NR MSY83325.1 2900548 g33918 i0 33.3 0.879310344827586 51 33 86.2 1 7 156 20 70 MSY83325.1 hypothetical protein [Actinomycetota bacterium] diamond 153 39.7 1 Bacteria   Bacillati Actinomycetota         Actinomycetota bacterium
30009436 30009436 PRJNA1195551_S_NODE_37051_length_168_cov_1.747899_g36698_i0 PRJNA1195551 37051 168 1.747899 2.93647032 Arthrobacter sp. EPSL27 1745378 Bacteria Bacteria 41.2 0.0486   NR WP_066435757.1 1745378 g36698 i0 51.2 0.732142857142857 41 16 66.1 1 52 162 94 134 WP_066435757.1 GNAT family N-acetyltransferase [Arthrobacter sp. EPSL27] diamond 123 41.2 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Micrococcaceae Arthrobacter Arthrobacter sp. EPSL27
30103920 30103920 PRJNA1195551_S_NODE_40232_length_163_cov_0.912281_g39879_i0 PRJNA1195551 40232 163 0.912281 1.48701803 Solirubrobacteraceae bacterium 2586742 Bacteria Bacteria 45.4 1.07e-4   NR MEA2380772.1 2586742 g39879 i0 58.3 0.662576687116564 36 15 66.3 0 49 156 4 39 MEA2380772.1 hypothetical protein [Solirubrobacteraceae bacterium] diamond 108 45.4 1 Bacteria   Bacillati Actinomycetota Thermoleophilia Solirubrobacterales Solirubrobacteraceae   Solirubrobacteraceae bacterium
30230410 30230410 PRJNA1195551_S_NODE_42312_length_158_cov_2.385321_g41959_i0 PRJNA1195551 42312 158 2.385321 3.76880718 Candidatus Blastococcus massiliensis 1470358 Bacteria Bacteria 84.3 1.39e-17   NR WP_051515436.1 1470358 g41959 i0 75 1.9746835443038 52 13 98.7 0 156 1 287 338 WP_051515436.1 hypothetical protein [Candidatus Blastococcus massiliensis] diamond 312 84.3 1 Bacteria   Bacillati Actinomycetota Actinomycetes Geodermatophilales Geodermatophilaceae Blastococcus Candidatus Blastococcus massiliensis
30546387 30546387 PRJNA1195551_S_NODE_23513_length_208_cov_1.188679_g23160_i0 PRJNA1195551 23513 208 1.188679 2.47245232 Solirubrobacteraceae bacterium 2586742 Bacteria Bacteria 42 0.0409   NR HMD56173.1 2586742 g23160 i0 51.1 0.649038461538462 45 18 59.1 1 39 161 10 54 HMD56173.1 cytochrome c oxidase assembly protein [Solirubrobacteraceae bacterium] diamond 135 42 1 Bacteria   Bacillati Actinomycetota Thermoleophilia Solirubrobacterales Solirubrobacteraceae   Solirubrobacteraceae bacterium
30672635 30672635 PRJNA1195551_S_NODE_28773_length_189_cov_1.442857_g28420_i0 PRJNA1195551 28773 189 1.442857 2.72699973 Nocardiopsis terrae 372655 Bacteria Bacteria 41.6 0.0379   NR WP_191273017.1 372655 g28420 i0 33.9 0.936507936507937 59 36 88.9 1 1 168 19 77 WP_191273017.1 hypothetical protein [Nocardiopsis terrae] diamond 177 41.6 1 Bacteria   Bacillati Actinomycetota Actinomycetes Streptosporangiales Nocardiopsidaceae Nocardiopsis Nocardiopsis terrae
30767584 30767584 PRJNA1195551_S_NODE_17974_length_234_cov_2.751351_g17621_i0 PRJNA1195551 17974 234 2.751351 6.43816134 Actinomycetota bacterium 2900548 Bacteria Bacteria 42.7 0.00606   NR MSY83325.1 2900548 g17621 i0 37.9 0.743589743589744 58 35 73.1 1 218 48 13 70 MSY83325.1 hypothetical protein [Actinomycetota bacterium] diamond 174 42.7 1 Bacteria   Bacillati Actinomycetota         Actinomycetota bacterium
30862310 30862310 PRJNA1195551_S_NODE_36874_length_168_cov_4.126050_g36521_i0 PRJNA1195551 36874 168 4.12605 6.931764 Kineosporiaceae bacterium 2487580 Bacteria Bacteria 42 0.0254   NR HST84241.1 2487580 g36521 i0 42.9 0.75 42 24 75 0 33 158 138 179 HST84241.1 sodium-translocating pyrophosphatase [Kineosporiaceae bacterium] diamond 126 42 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kineosporiales Kineosporiaceae   Kineosporiaceae bacterium
31020407 31020407 PRJNA1195551_S_NODE_14975_length_253_cov_2.299020_g14622_i0 PRJNA1195551 14975 253 2.29902 5.8165206 Bifidobacterium sp. 41200 Bacteria Bacteria 43.9 0.0144   NR HCH22157.1 41200 g14622 i0 42.6 0.557312252964427 47 24 52.2 1 174 43 199 245 HCH22157.1 hypothetical protein [Bifidobacterium sp.] diamond 141 43.9 1 Bacteria   Bacillati Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium sp.
31146269 31146269 PRJNA1195551_S_NODE_11535_length_280_cov_2.251082_g11182_i0 PRJNA1195551 11535 280 2.251082 6.3030296 Nocardioidaceae bacterium 1871072 Bacteria Bacteria 45.1 0.0026   NR HEY0773885.1 1871072 g11182 i0 52 1.10357142857143 50 21 53.6 2 225 76 68 114 HEY0773885.1 DUF6504 family protein [Nocardioidaceae bacterium] diamond 309 45.1 1 Bacteria   Bacillati Actinomycetota Actinomycetes Propionibacteriales Nocardioidaceae   Nocardioidaceae bacterium
31241386 31241386 PRJNA1195551_S_NODE_32415_length_178_cov_5.240310_g32062_i0 PRJNA1195551 32415 178 5.24031 9.3277518 Piscicoccus intestinalis 746033 Bacteria Bacteria 43.5 0.00832   NR WP_068430052.1 746033 g32062 i0 47.5 0.674157303370786 40 21 67.4 0 29 148 205 244 WP_068430052.1 universal stress protein [Piscicoccus intestinalis] diamond 120 43.5 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Dermatophilaceae Piscicoccus Piscicoccus intestinalis
31431248 31431248 PRJNA1195551_S_NODE_28136_length_191_cov_1.464789_g27783_i0 PRJNA1195551 28136 191 1.464789 2.79774699 Arthrobacter sp. zg-Y111 1667 Bacteria Bacteria 41.6 0.0177   NR WP_227934269.1 2886932 g27783 i0 52.9 1.33507853403141 34 16 53.4 0 29 130 17 50 WP_227934269.1 DUF4326 domain-containing protein [Arthrobacter sp. zg-Y1110] diamond 255 41.6 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Micrococcaceae Arthrobacter Arthrobacter sp. zg-Y1110
31463131 31463131 PRJNA1195551_S_NODE_24716_length_203_cov_2.025974_g24363_i0 PRJNA1195551 24716 203 2.025974 4.11272722 Streptomyces umbrinus 67370 Bacteria Bacteria 42 0.0233   NR WP_364197828.1 67370 g24363 i0 39.3 1.6551724137931 56 28 82.8 2 26 193 57 106 WP_364197828.1 GNAT family N-acetyltransferase [Streptomyces umbrinus] diamond 336 42 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces umbrinus
32348966 32348966 PRJNA1195551_S_NODE_13519_length_263_cov_5.126168_g13166_i0 PRJNA1195551 13519 263 5.126168 13.48182184 Nakamurella sp. 1869182 Bacteria Bacteria 43.1 0.0329   NR HEY7814265.1 1869182 g13166 i0 33.8 0.809885931558935 71 36 75.3 2 233 36 191 255 HEY7814265.1 alpha/beta hydrolase [Nakamurella sp.] diamond 213 43.1 1 Bacteria   Bacillati Actinomycetota Actinomycetes Nakamurellales Nakamurellaceae Nakamurella Nakamurella sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;