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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA1195551" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 11 ✖

bioproject 1

  • PRJNA1195551 · 11 ✖

analysis 1

  • diamond · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27641325 27641325 PRJNA1195551_S_NODE_23684_length_207_cov_2.601266_g23331_i0 PRJNA1195551 23684 207 2.601266 5.38462062 Symbiochloris irregularis 706552 Plants Plants 41.2 0.048   NR KAK9812212.1 706552 g23331 i0 45.2 0.608695652173913 42 23 60.9 0 161 36 91 132 KAK9812212.1 hypothetical protein WJX73_004385 [Symbiochloris irregularis] diamond 126 41.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
27799166 27799166 PRJNA1195551_S_NODE_26664_length_196_cov_1.414966_g26311_i0 PRJNA1195551 26664 196 1.414966 2.77333336 Scenedesmus sp. PABB 2909984 Plants Plants 44.3 0.00563   NR KAF8057726.1 2742167 g26311 i0 56.8 0.566326530612245 37 14 53.6 1 174 70 257 293 KAF8057726.1 NAP1 [Scenedesmus sp. PABB004] diamond 111 44.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. PABB004
27893596 27893596 PRJNA1195551_S_NODE_36685_length_169_cov_0.866667_g36332_i0 PRJNA1195551 36685 169 0.866667 1.46466723 Coccomyxa viridis 1274662 Plants Plants 41.2 0.0482   NR CAL5222282.1 1274662 g36332 i0 70 0.355029585798817 20 6 35.5 0 3 62 4065 4084 CAL5222282.1 g4621 [Coccomyxa viridis] diamond 60 41.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
28177636 28177636 PRJNA1195551_S_NODE_9106_length_305_cov_2.843750_g8753_i0 PRJNA1195551 9106 305 2.84375 8.6734375 Monoraphidium neglectum 145388 Plants Plants 70.5 5.67e-12   NR XP_013900720.1 145388 g8753 i0 66 0.924590163934426 47 16 46.2 0 303 163 217 263 XP_013900720.1 PsbP domain-containing protein 6 [Monoraphidium neglectum] diamond 282 70.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
29018090 29018090 PRJNA1195551_S_NODE_29788_length_186_cov_1.138686_g29435_i0 PRJNA1195551 29788 186 1.138686 2.11795596 Coccomyxa 41891 Plants Plants 54.7 1.17e-7   NR CAL8469249.1 1965095 g29435 i0 56.3 1.54838709677419 48 21 77.4 0 185 42 61 108 CAL8469249.1 g8790 [Coccomyxa elongata] diamond 288 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa elongata
29175815 29175815 PRJNA1195551_S_NODE_12069_length_275_cov_3.681416_g11716_i0 PRJNA1195551 12069 275 3.681416 10.123894 Chlorellaceae 35461 Plants Plants 91.3 4.06e-19   NR PRW57126.1 3076 g11716 i0 85.4 5.71636363636364 48 7 52.4 0 273 130 441 488 PRW57126.1 Photosystem II 10 kDa chloroplastic [Chlorella sorokiniana] diamond 1572 91.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
30514774 30514774 PRJNA1195551_S_NODE_19953_length_224_cov_1.188571_g19600_i0 PRJNA1195551 19953 224 1.188571 2.66239904 Micractinium tetrahymenae 2728915 Plants Plants 74.3 2.1e-13   NR KAL4458929.1 2728915 g19600 i0 50 0.883928571428571 66 33 88.4 0 224 27 423 488 KAL4458929.1 hypothetical protein ABPG75_013794 [Micractinium tetrahymenae] diamond 198 74.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium tetrahymenae
30672634 30672634 PRJNA1195551_S_NODE_27153_length_194_cov_2.593103_g26800_i0 PRJNA1195551 27153 194 2.593103 5.03061982 Astrephomene gubernaculifera 47775 Plants Plants 47.4 2.61e-4   NR GFR53048.1 47775 g26800 i0 71.4 0.43298969072165 28 8 43.3 0 179 96 150 177 GFR53048.1 hypothetical protein Agub_g15749 [Astrephomene gubernaculifera] diamond 84 47.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Astrephomenaceae Astrephomene Astrephomene gubernaculifera
31178015 31178015 PRJNA1195551_S_NODE_22795_length_211_cov_1.604938_g22442_i0 PRJNA1195551 22795 211 1.604938 3.38641918 [Myrmecia] bisecta 41462 Plants Plants 85.9 3.69e-19   NR KAK9815510.1 41462 g22442 i0 70.2 0.81042654028436 57 17 81 0 1 171 107 163 KAK9815510.1 hypothetical protein WJX72_004886 [[Myrmecia] bisecta] diamond 171 85.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
31779107 31779107 PRJNA1195551_S_NODE_16337_length_244_cov_2.400000_g15984_i0 PRJNA1195551 16337 244 2.4 5.856 Pedinophyceae sp. YPF-7 765719 Plants Plants 55.8 2.12e-7   NR CAG9461740.1 765719 g15984 i0 60.4 1.79508196721311 48 19 59 0 242 99 106 153 CAG9461740.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 438 55.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
31893052 31893052 PRJNA1195551_S_NODE_7537_length_327_cov_3.348921_g7184_i0 PRJNA1195551 7537 327 3.348921 10.95097167 Volvocaceae 3065 Plants Plants 42 0.0343   NR KXZ52926.1 33097 g7184 i0 46.2 1.28440366972477 65 28 55 4 327 148 24 86 KXZ52926.1 hypothetical protein GPECTOR_8g302 [Gonium pectorale] diamond 420 42 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;