contig_metadata
6 rows where analysis = "diamond", bioproject = "PRJNA1195551" and tax_clade = "PVC group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26851164 | 26851164 | PRJNA1195551_S_NODE_20121_length_223_cov_2.120690_g19768_i0 | PRJNA1195551 | 20121 | 223 | 2.12069 | 4.7291387 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 42.4 | 0.0398 | NR | MBM4027505.1 | 2026780 | g19768 | i0 | 44.3 | 0.820627802690583 | 61 | 28 | 82.1 | 2 | 37 | 219 | 29 | 83 | MBM4027505.1 LamG domain-containing protein [Planctomycetota bacterium] | diamond | 183 | 42.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 28051558 | 28051558 | PRJNA1195551_S_NODE_29005_length_188_cov_2.366906_g28652_i0 | PRJNA1195551 | 29005 | 188 | 2.366906 | 4.44978328 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 43.5 | 0.00935 | NR | MBI4554663.1 | 2026780 | g28652 | i0 | 43.2 | 1.77127659574468 | 37 | 21 | 59 | 0 | 120 | 10 | 184 | 220 | MBI4554663.1 cytochrome C [Planctomycetota bacterium] | diamond | 333 | 43.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 28746203 | 28746203 | PRJNA1195551_S_NODE_31487_length_181_cov_1.575758_g31134_i0 | PRJNA1195551 | 31487 | 181 | 1.575758 | 2.85212198 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 41.6 | 0.0426 | NR | MBI3416934.1 | 2026799 | g31134 | i0 | 48.8 | 0.679558011049724 | 41 | 16 | 68 | 1 | 177 | 55 | 483 | 518 | MBI3416934.1 2-isopropylmalate synthase [Verrucomicrobiota bacterium] | diamond | 123 | 41.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31747504 | 31747504 | PRJNA1195551_S_NODE_20117_length_223_cov_2.298851_g19764_i0 | PRJNA1195551 | 20117 | 223 | 2.298851 | 5.12643773 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 42 | 0.0466 | NR | HVG94163.1 | 2026780 | g19764 | i0 | 37.5 | 0.645739910313901 | 48 | 30 | 64.6 | 0 | 49 | 192 | 68 | 115 | HVG94163.1 phosphatase PAP2 family protein [Planctomycetota bacterium] | diamond | 144 | 42 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 31937276 | 31937276 | PRJNA1195551_S_NODE_34317_length_174_cov_1.248000_g33964_i0 | PRJNA1195551 | 34317 | 174 | 1.248 | 2.17152 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 42 | 0.028 | NR | MBU4366548.1 | 2026799 | g33964 | i0 | 32.2 | 1.01724137931034 | 59 | 35 | 94.8 | 2 | 171 | 7 | 202 | 259 | MBU4366548.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 177 | 42 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32443945 | 32443945 | PRJNA1195551_S_NODE_21379_length_217_cov_2.464286_g21026_i0 | PRJNA1195551 | 21379 | 217 | 2.464286 | 5.34750062 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 42.4 | 0.0348 | NR | MEP7015433.1 | 2026799 | g21026 | i0 | 42.6 | 0.649769585253456 | 47 | 25 | 62.2 | 1 | 6 | 140 | 120 | 166 | MEP7015433.1 acyl-CoA dehydrogenase family protein [Verrucomicrobiota bacterium] | diamond | 141 | 42.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;