RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1195374" and tax_clade = "Pithoviruses"

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tax_superkingdom 1

tax_clade 1

  • Pithoviruses · 2 ✖

bioproject 1

  • PRJNA1195374 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30514737 30514737 PRJNA1195374_P_NODE_44413_length_333_cov_1.180769_g44069_i0 PRJNA1195374 44413 333 1.180769 3.93196077 Solumvirus sp. 2487773 Viruses Viruses 165 6.59e-49   NR AYV86227.1 2487773 g44069 i0 71.7 0.954954954954955 106 30 95.5 0 331 14 72 177 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 318 165 1 Viruses Pithoviruses             Solumvirus sp.
31273148 31273148 PRJNA1195374_P_NODE_5315_length_909_cov_2.544258_g5049_i0 PRJNA1195374 5315 909 2.544258 23.12730522 Solumvirus sp. 2487773 Viruses Viruses 203 5.29e-61   NR AYV86227.1 2487773 g5049 i0 70.6 0.448844884488449 136 40 44.9 0 148 555 42 177 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 408 203 1 Viruses Pithoviruses             Solumvirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;