contig_metadata
48 rows where analysis = "diamond", bioproject = "PRJNA1192965" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2871283 | 2871283 | PRJNA1192965_P_NODE_3283_length_251_cov_0.865169_g3264_i0 | PRJNA1192965 | 3283 | 251 | 0.865169 | 2.17157419 | Roseateles sp. BYS78W | 3299025 | Bacteria | Bacteria | 141 | 7.21e-37 | NR | WP_394407222.1 | 3299025 | g3264 | i0 | 91.6 | 0.99203187250996006 | 83 | 7 | 99.2 | 0 | 3 | 251 | 1711 | 1793 | WP_394407222.1 YDG domain-containing protein [Roseateles sp. BYS78W] | diamond | 249 | 141 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Pelomonas candidula | ||
| 4147435 | 4147435 | PRJNA1192965_P_NODE_564_length_492_cov_4.023866_g545_i0 | PRJNA1192965 | 564 | 492 | 4.023866 | 19.79742072 | Bosea sp. (in: a-proteobacteria) | 1871050 | Bacteria | Bacteria | 202 | 8.430000000000001e-64 | NR | WP_305683010.1 | 1871050 | g545 | i0 | 80.7 | 0.884146341463415 | 145 | 25 | 86.6 | 1 | 42 | 467 | 1 | 145 | WP_305683010.1 hypothetical protein [Bosea sp. (in: a-proteobacteria)] | diamond | 435 | 202 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Boseaceae | Bosea | Bosea sp. (in: a-proteobacteria) | ||
| 9970526 | 9970526 | PRJNA1192965_P_NODE_768_length_428_cov_5.149296_g749_i0 | PRJNA1192965 | 768 | 428 | 5.149296 | 22.03898688 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 196 | 1.04e-61 | NR | MEL6702598.1 | 1977087 | g749 | i0 | 68.3 | 1.99065420560748 | 142 | 44 | 99.5 | 1 | 1 | 426 | 3 | 143 | MEL6702598.1 uL15 family ribosomal protein [Pseudomonadota bacterium] | diamond | 852 | 196 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 11799086 | 11799086 | PRJNA1192965_P_NODE_4190_length_246_cov_0.890173_g4171_i0 | PRJNA1192965 | 4190 | 246 | 0.890173 | 2.18982558 | Methyloversatilis discipulorum | 1119528 | Bacteria | Bacteria | 171 | 4.69e-50 | NR | WP_019918866.1 | 1119528 | g4171 | i0 | 95.1 | 1 | 82 | 4 | 100 | 0 | 246 | 1 | 245 | 326 | WP_019918866.1 DUF3047 domain-containing protein [Methyloversatilis discipulorum] | diamond | 246 | 171 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Sterolibacteriaceae | Methyloversatilis | Methyloversatilis discipulorum | ||
| 13074095 | 13074095 | PRJNA1192965_P_NODE_1791_length_312_cov_4.774059_g1772_i0 | PRJNA1192965 | 1791 | 312 | 4.774059 | 14.89506408 | root | 1 | Root_unresolved | Root_unresolved | 73.2 | 3.53e-14 | NR | MEL6702627.1 | 1977087 | g1772 | i0 | 43.7 | 1.89423076923077 | 71 | 40 | 68.3 | 0 | 310 | 98 | 5 | 75 | MEL6702627.1 60S acidic ribosomal protein P1 [Pseudomonadota bacterium] | diamond | 591 | 73.9 | 0.990527740189445 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 14349565 | 14349565 | PRJNA1192965_P_NODE_3032_length_258_cov_1.664865_g3013_i0 | PRJNA1192965 | 3032 | 258 | 1.664865 | 4.2953517 | Candidatus Parabeggiatoa sp. nov. 1 | 3162725 | Bacteria | Bacteria | 80.9 | 2.5e-16 | NR | RKZ82777.1 | 3162725 | g3013 | i0 | 52.9 | 1.98837209302326 | 85 | 36 | 98.8 | 2 | 1 | 255 | 14 | 94 | RKZ82777.1 MAG: short-chain dehydrogenase [Candidatus Parabeggiatoa sp. nov. 1] | diamond | 513 | 80.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Thiotrichales | Thiotrichaceae | Candidatus Parabeggiatoa | Candidatus Parabeggiatoa sp. nov. 1 | ||
| 18172118 | 18172118 | PRJNA1192965_P_NODE_2655_length_272_cov_1.160804_g2636_i0 | PRJNA1192965 | 2655 | 272 | 1.160804 | 3.15738688 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 149 | 5.219999999999999e-43 | NR | MEL6691357.1 | 1977087 | g2636 | i0 | 80 | 0.992647058823529 | 90 | 18 | 99.3 | 0 | 271 | 2 | 121 | 210 | MEL6691357.1 NADP-dependent isocitrate dehydrogenase [Pseudomonadota bacterium] | diamond | 270 | 149 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 19446549 | 19446549 | PRJNA1192965_P_NODE_4116_length_246_cov_1.526012_g4097_i0 | PRJNA1192965 | 4116 | 246 | 1.526012 | 3.75398952 | Methylobacterium | 407 | Bacteria | Bacteria | 152 | 5.34e-45 | NR | WP_238229347.1 | 270350 | g4097 | i0 | 98.7 | 1.90243902439024 | 78 | 1 | 95.1 | 0 | 11 | 244 | 1 | 78 | WP_238229347.1 hypothetical protein [Methylobacterium hispanicum] | diamond | 468 | 152 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium hispanicum | ||
| 20168651 | 20168651 | PRJNA1192965_P_NODE_1036_length_385_cov_1.480769_g1017_i0 | PRJNA1192965 | 1036 | 385 | 1.480769 | 5.70096065 | Hyphomicrobiales | 356 | Bacteria | Bacteria | 113 | 1.16e-29 | NR | NDA47958.1 | 1913988 | g1017 | i0 | 67.4 | 6.23376623376623 | 89 | 29 | 69.4 | 0 | 384 | 118 | 25 | 113 | NDA47958.1 molecular chaperone GroEL [Alphaproteobacteria bacterium] | diamond | 2400 | 113 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Alphaproteobacteria bacterium | |||||
| 23272683 | 23272683 | PRJNA1192965_P_NODE_3659_length_249_cov_0.875000_g3640_i0 | PRJNA1192965 | 3659 | 249 | 0.875 | 2.17875 | Aquabacterium | 92793 | Bacteria | Bacteria | 119 | 2.56e-29 | NR | WP_133609740.1 | 70586 | g3640 | i0 | 80.5 | 1.97590361445783 | 82 | 16 | 98.8 | 0 | 247 | 2 | 246 | 327 | WP_133609740.1 TolC family protein [Aquabacterium commune] | diamond | 492 | 120 | 0.991666666666667 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Aquabacterium | Aquabacterium commune | |||
| 24546566 | 24546566 | PRJNA1192965_P_NODE_4760_length_243_cov_0.905882_g4741_i0 | PRJNA1192965 | 4760 | 243 | 0.905882 | 2.20129326 | Sphingomonas echinoides | 59803 | Bacteria | Bacteria | 131 | 5.74e-38 | NR | WP_245535585.1 | 59803 | g4741 | i0 | 97.3 | 0.91358024691358 | 74 | 2 | 91.4 | 0 | 21 | 242 | 14 | 87 | WP_245535585.1 hypothetical protein [Sphingomonas echinoides] | diamond | 222 | 131 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas echinoides | ||
| 26648065 | 26648065 | PRJNA1192965_P_NODE_5201_length_241_cov_0.916667_g5182_i0 | PRJNA1192965 | 5201 | 241 | 0.916667 | 2.20916747 | Alphaproteobacteria | 28211 | Bacteria | Bacteria | 73.6 | 6.87e-14 | NR | WP_039243664.1 | 172043 | g5182 | i0 | 75 | 1.76763485477178 | 44 | 11 | 54.8 | 0 | 134 | 3 | 121 | 164 | WP_039243664.1 NAD(P)H:quinone oxidoreductase [Brevundimonas nasdae] | diamond | 426 | 73.9 | 0.995940460081191 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Brevundimonas | Brevundimonas nasdae | ||
| 27040785 | 27040785 | PRJNA1192965_P_NODE_5102_length_241_cov_0.916667_g5083_i0 | PRJNA1192965 | 5102 | 241 | 0.916667 | 2.20916747 | Candidatus Liberibacter brunswickensis | 1968796 | Bacteria | Bacteria | 46.2 | 0.00215 | NR | WP_333948061.1 | 1968796 | g5083 | i0 | 40.9 | 0.547717842323652 | 44 | 26 | 54.8 | 0 | 4 | 135 | 369 | 412 | WP_333948061.1 flagellar hook-associated protein FlgK [Candidatus Liberibacter brunswickensis] | diamond | 132 | 46.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Liberibacter | Candidatus Liberibacter brunswickensis | ||
| 27103822 | 27103822 | PRJNA1192965_P_NODE_1702_length_318_cov_2.828571_g1683_i0 | PRJNA1192965 | 1702 | 318 | 2.828571 | 8.99485578 | Moraxella sp. | 479 | Bacteria | Bacteria | 52.4 | 3.65e-5 | NR | MDO4700917.1 | 479 | g1683 | i0 | 31.8 | 1.0377358490566 | 110 | 65 | 100 | 3 | 318 | 1 | 133 | 236 | MDO4700917.1 leucyl aminopeptidase [Moraxella sp.] | diamond | 330 | 52.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Moraxella | Moraxella sp. | ||
| 27420280 | 27420280 | PRJNA1192965_P_NODE_1323_length_352_cov_1.025090_g1304_i0 | PRJNA1192965 | 1323 | 352 | 1.02509 | 3.6083168 | Rhodospirillales bacterium | 2026786 | Bacteria | Bacteria | 94.7 | 4.74e-20 | NR | MCC7168764.1 | 2026786 | g1304 | i0 | 41 | 0.997159090909091 | 117 | 68 | 98.9 | 1 | 5 | 352 | 276 | 392 | MCC7168764.1 pyridoxal-phosphate dependent enzyme [Rhodospirillales bacterium] | diamond | 351 | 94.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Rhodospirillales bacterium | ||||
| 27641221 | 27641221 | PRJNA1192965_P_NODE_3964_length_247_cov_0.885057_g3945_i0 | PRJNA1192965 | 3964 | 247 | 0.885057 | 2.18609079 | Candidatus Thiodiazotropha sp. | 2847306 | Bacteria | Bacteria | 44.3 | 0.0114 | NR | MET0052605.1 | 2847306 | g3945 | i0 | 43.2 | 0.534412955465587 | 44 | 25 | 53.4 | 0 | 219 | 88 | 1 | 44 | MET0052605.1 EAL domain-containing protein [Candidatus Thiodiazotropha sp.] | diamond | 132 | 44.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Chromatiales | Sedimenticolaceae | Candidatus Thiodiazotropha | Candidatus Thiodiazotropha sp. | ||
| 27956831 | 27956831 | PRJNA1192965_P_NODE_5205_length_241_cov_0.916667_g5186_i0 | PRJNA1192965 | 5205 | 241 | 0.916667 | 2.20916747 | Pseudomonas syringae group genomosp. 7 | 251699 | Bacteria | Bacteria | 40.4 | 0.0447 | NR | WP_395585349.1 | 251699 | g5186 | i0 | 32.8 | 0.796680497925311 | 64 | 37 | 79.7 | 2 | 21 | 212 | 22 | 79 | WP_395585349.1 hypothetical protein, partial [Pseudomonas syringae group genomosp. 7] | diamond | 192 | 40.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas syringae group genomosp. 7 | ||
| 28146418 | 28146418 | PRJNA1192965_P_NODE_1565_length_329_cov_0.875000_g1546_i0 | PRJNA1192965 | 1565 | 329 | 0.875 | 2.87875 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 78.6 | 2.7e-14 | NR | MEO1493160.1 | 1977087 | g1546 | i0 | 50 | 0.838905775075988 | 92 | 46 | 83.9 | 0 | 6 | 281 | 506 | 597 | MEO1493160.1 molecular chaperone DnaK [Pseudomonadota bacterium] | diamond | 276 | 78.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 28146420 | 28146420 | PRJNA1192965_P_NODE_2445_length_280_cov_1.487923_g2426_i0 | PRJNA1192965 | 2445 | 280 | 1.487923 | 4.1661844 | Rickettsiales bacterium | 2026788 | Bacteria | Bacteria | 60.5 | 5.76e-9 | NR | MDD2840773.1 | 2026788 | g2426 | i0 | 63.2 | 0.407142857142857 | 38 | 14 | 40.7 | 0 | 124 | 11 | 1 | 38 | MDD2840773.1 hypothetical protein [Rickettsiales bacterium] | diamond | 114 | 60.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rickettsiales | Rickettsiales bacterium | ||||
| 28272323 | 28272323 | PRJNA1192965_P_NODE_1606_length_325_cov_1.222222_g1587_i0 | PRJNA1192965 | 1606 | 325 | 1.222222 | 3.9722215 | Thiobacillus sp. | 924 | Bacteria | Bacteria | 50.1 | 7.27e-5 | NR | MDZ7586086.1 | 924 | g1587 | i0 | 75 | 0.221538461538462 | 24 | 6 | 22.2 | 0 | 239 | 168 | 124 | 147 | MDZ7586086.1 hypothetical protein [Thiobacillus sp.] | diamond | 72 | 50.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Thiobacillaceae | Thiobacillus | Thiobacillus sp. | ||
| 28335632 | 28335632 | PRJNA1192965_P_NODE_846_length_414_cov_1.354839_g827_i0 | PRJNA1192965 | 846 | 414 | 1.354839 | 5.60903346 | Oceanobacter sp. | 2030817 | Bacteria | Bacteria | 75.5 | 6.86e-13 | NR | PHR97721.1 | 2030817 | g827 | i0 | 35.8 | 0.768115942028985 | 106 | 68 | 76.8 | 0 | 97 | 414 | 108 | 213 | PHR97721.1 MAG: hypothetical protein COA68_12290 [Oceanobacter sp.] | diamond | 318 | 75.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Oceanospirillales | Oceanospirillaceae | Oceanobacter | Oceanobacter sp. | ||
| 28620020 | 28620020 | PRJNA1192965_P_NODE_4367_length_245_cov_0.895349_g4348_i0 | PRJNA1192965 | 4367 | 245 | 0.895349 | 2.19360505 | Pelomonas sp. Root1237 | 1736434 | Bacteria | Bacteria | 75.5 | 6.41e-14 | NR | WP_056197611.1 | 1736434 | g4348 | i0 | 88.1 | 0.514285714285714 | 42 | 3 | 49 | 1 | 1 | 120 | 280 | 321 | WP_056197611.1 CysB family HTH-type transcriptional regulator [Pelomonas sp. Root1237] | diamond | 126 | 75.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Pelomonas sp. Root1237 | ||
| 28777575 | 28777575 | PRJNA1192965_P_NODE_1587_length_327_cov_1.212598_g1568_i0 | PRJNA1192965 | 1587 | 327 | 1.212598 | 3.96519546 | Phenylobacterium sp. | 1871053 | Bacteria | Bacteria | 165 | 3.71e-49 | NR | WP_305659473.1 | 1871053 | g1568 | i0 | 71.3 | 0.990825688073395 | 108 | 31 | 99.1 | 0 | 1 | 324 | 91 | 198 | WP_305659473.1 transposase [Phenylobacterium sp.] | diamond | 324 | 165 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Phenylobacterium | Phenylobacterium sp. | ||
| 28872347 | 28872347 | PRJNA1192965_P_NODE_2688_length_270_cov_2.299492_g2669_i0 | PRJNA1192965 | 2688 | 270 | 2.299492 | 6.2086284 | Nevskiales bacterium | 2026766 | Bacteria | Bacteria | 90.1 | 2.38e-21 | NR | HXG27613.1 | 2026766 | g2669 | i0 | 57.1 | 0.933333333333333 | 84 | 28 | 91.1 | 2 | 7 | 252 | 1 | 78 | HXG27613.1 acyl-CoA-binding protein [Nevskiales bacterium] | diamond | 252 | 90.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Nevskiales | Nevskiales bacterium | ||||
| 29030521 | 29030521 | PRJNA1192965_P_NODE_2908_length_262_cov_2.137566_g2889_i0 | PRJNA1192965 | 2908 | 262 | 2.137566 | 5.60042292 | Acetobacter indonesiensis | 104101 | Bacteria | Bacteria | 43.1 | 0.0296 | NR | WP_084593595.1 | 104101 | g2889 | i0 | 55.9 | 0.389312977099237 | 34 | 15 | 38.9 | 0 | 161 | 262 | 156 | 189 | WP_084593595.1 cold-shock protein [Acetobacter indonesiensis] | diamond | 102 | 43.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Acetobacterales | Acetobacteraceae | Acetobacter | Acetobacter indonesiensis | ||
| 29251120 | 29251120 | PRJNA1192965_P_NODE_1689_length_319_cov_3.121951_g1670_i0 | PRJNA1192965 | 1689 | 319 | 3.121951 | 9.95902369 | Beggiatoa leptomitoformis | 288004 | Bacteria | Bacteria | 136 | 1.5e-36 | NR | WP_062149001.1 | 288004 | g1670 | i0 | 66.3 | 12.7617554858934 | 104 | 35 | 97.8 | 0 | 315 | 4 | 217 | 320 | WP_062149001.1 malate dehydrogenase [Beggiatoa leptomitoformis] | diamond | 4071 | 136 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Thiotrichales | Thiotrichaceae | Beggiatoa | Beggiatoa leptomitoformis | ||
| 29282692 | 29282692 | PRJNA1192965_P_NODE_3329_length_251_cov_0.865169_g3310_i0 | PRJNA1192965 | 3329 | 251 | 0.865169 | 2.17157419 | Roseateles sp. DXS2 | 1971397 | Bacteria | Bacteria | 163 | 3.37e-45 | NR | WP_394510424.1 | 3299030 | g3310 | i0 | 96.4 | 2.97609561752988 | 83 | 3 | 99.2 | 0 | 1 | 249 | 129 | 211 | WP_394510424.1 thiamine pyrophosphate-binding protein [Roseateles sp. DXS20W] | diamond | 747 | 163 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Pelomonas lactea | ||
| 29427941 | 29427941 | PRJNA1192965_P_NODE_4889_length_242_cov_0.911243_g4870_i0 | PRJNA1192965 | 4889 | 242 | 0.911243 | 2.20520806 | Bacteria | 2 | Bacteria | Bacteria | 103 | 2e-23 | NR | OJY65006.1 | 1895826 | g4870 | i0 | 73.5 | 1.68595041322314 | 68 | 18 | 84.3 | 0 | 240 | 37 | 1298 | 1365 | OJY65006.1 MAG: hypothetical protein BGP12_04590 [Rhodospirillales bacterium 70-18] | diamond | 408 | 103 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Rhodospirillales bacterium 70-18 | ||||
| 29440454 | 29440454 | PRJNA1192965_P_NODE_3530_length_250_cov_0.870056_g3511_i0 | PRJNA1192965 | 3530 | 250 | 0.870056 | 2.17514 | Alphaproteobacteria bacterium | 1913988 | Bacteria | Bacteria | 112 | 4.58e-27 | NR | MDX1921780.1 | 1913988 | g3511 | i0 | 69.5 | 0.984 | 82 | 22 | 98.4 | 1 | 249 | 4 | 331 | 409 | MDX1921780.1 ActS/PrrB/RegB family redox-sensitive histidine kinase [Alphaproteobacteria bacterium] | diamond | 246 | 112 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Alphaproteobacteria bacterium | |||||
| 29535460 | 29535460 | PRJNA1192965_P_NODE_3590_length_250_cov_0.870056_g3571_i0 | PRJNA1192965 | 3590 | 250 | 0.870056 | 2.17514 | Dyella sp. | 1869338 | Bacteria | Bacteria | 131 | 1.32e-33 | NR | WP_309444451.1 | 1869338 | g3571 | i0 | 75.9 | 1.992 | 83 | 20 | 99.6 | 0 | 2 | 250 | 205 | 287 | WP_309444451.1 hypothetical protein, partial [Dyella sp.] | diamond | 498 | 131 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Rhodanobacteraceae | Dyella | Dyella sp. | ||
| 29756354 | 29756354 | PRJNA1192965_P_NODE_2651_length_272_cov_1.281407_g2632_i0 | PRJNA1192965 | 2651 | 272 | 1.281407 | 3.48542704 | Roseateles cellulosilyticus | 2906762 | Bacteria | Bacteria | 120 | 1.7199999999999995e-31 | NR | WP_233370197.1 | 2906762 | g2632 | i0 | 65.6 | 1.98529411764706 | 90 | 31 | 99.3 | 0 | 272 | 3 | 143 | 232 | WP_233370197.1 substrate-binding periplasmic protein [Roseateles cellulosilyticus] | diamond | 540 | 120 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Pelomonas cellulosilytica | ||
| 30135205 | 30135205 | PRJNA1192965_P_NODE_192_length_784_cov_4.250352_g178_i0 | PRJNA1192965 | 192 | 784 | 4.250352 | 33.32275968 | Alphaproteobacteria bacterium | 1913988 | Bacteria | Bacteria | 295 | 2.4399999999999995e-98 | NR | MDP3640845.1 | 1913988 | g178 | i0 | 78.9 | 0.669642857142857 | 175 | 32 | 67 | 2 | 623 | 99 | 12 | 181 | MDP3640845.1 LDL receptor domain-containing protein [Alphaproteobacteria bacterium] | diamond | 525 | 295 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Alphaproteobacteria bacterium | |||||
| 30420278 | 30420278 | PRJNA1192965_P_NODE_1033_length_385_cov_4.294872_g1014_i0 | PRJNA1192965 | 1033 | 385 | 4.294872 | 16.5352572 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 152 | 5.22e-45 | NR | MEL6702586.1 | 1977087 | g1014 | i0 | 57.3 | 0.911688311688312 | 117 | 50 | 91.2 | 0 | 354 | 4 | 1 | 117 | MEL6702586.1 uL14 family ribosomal protein [Pseudomonadota bacterium] | diamond | 351 | 152 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 30957229 | 30957229 | PRJNA1192965_P_NODE_1034_length_385_cov_4.112179_g1015_i0 | PRJNA1192965 | 1034 | 385 | 4.112179 | 15.83188915 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 155 | 3.4999999999999998e-46 | NR | MEL6702651.1 | 1977087 | g1015 | i0 | 70.8 | 7.28571428571429 | 113 | 32 | 87.3 | 1 | 369 | 34 | 7 | 119 | MEL6702651.1 30S ribosomal protein S11 [Pseudomonadota bacterium] | diamond | 2805 | 155 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 30988754 | 30988754 | PRJNA1192965_P_NODE_3254_length_251_cov_1.617978_g3235_i0 | PRJNA1192965 | 3254 | 251 | 1.617978 | 4.06112478 | Legionella fallonii | 96230 | Bacteria | Bacteria | 50.1 | 9.35e-5 | NR | WP_045095603.1 | 96230 | g3235 | i0 | 38.6 | 1.99601593625498 | 83 | 41 | 99.2 | 3 | 251 | 3 | 68 | 140 | WP_045095603.1 S1/P1 nuclease [Legionella fallonii] | diamond | 501 | 50.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Legionellales | Legionellaceae | Legionella | Legionella fallonii | ||
| 31039556 | 31039556 | PRJNA1192965_P_NODE_2755_length_268_cov_1.579487_g2736_i0 | PRJNA1192965 | 2755 | 268 | 1.579487 | 4.23302516 | Dongia | 1146845 | Bacteria | Bacteria | 80.5 | 2.37e-15 | NR | MEM7407024.1 | 1977087 | g2736 | i0 | 47.1 | 2.72014925373134 | 87 | 46 | 97.4 | 0 | 263 | 3 | 307 | 393 | MEM7407024.1 M20 family metallopeptidase [Pseudomonadota bacterium] | diamond | 729 | 81.3 | 0.990159901599016 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 31177921 | 31177921 | PRJNA1192965_P_NODE_2455_length_280_cov_1.115942_g2436_i0 | PRJNA1192965 | 2455 | 280 | 1.115942 | 3.1246376 | Rhizobium sp. | 391 | Bacteria | Bacteria | 83.2 | 3.18e-17 | NR | WP_407766259.1 | 391 | g2436 | i0 | 56.9 | 0.696428571428571 | 65 | 28 | 69.6 | 0 | 2 | 196 | 143 | 207 | WP_407766259.1 glycoside hydrolase family 19 protein [Rhizobium sp.] | diamond | 195 | 83.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Rhizobium | Rhizobium sp. | ||
| 31241297 | 31241297 | PRJNA1192965_P_NODE_3895_length_248_cov_0.880000_g3876_i0 | PRJNA1192965 | 3895 | 248 | 0.88 | 2.1824 | Hydrogenophaga sp. NFH-34 | 2744446 | Bacteria | Bacteria | 99.4 | 4.419999999999999e-23 | NR | WP_234263765.1 | 2744446 | g3876 | i0 | 67.5 | 0.931451612903226 | 77 | 25 | 93.1 | 0 | 15 | 245 | 88 | 164 | WP_234263765.1 alpha/beta fold hydrolase [Hydrogenophaga sp. NFH-34] | diamond | 231 | 99.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Hydrogenophaga | Hydrogenophaga sp. NFH-34 | ||
| 31747404 | 31747404 | PRJNA1192965_P_NODE_2817_length_265_cov_1.604167_g2798_i0 | PRJNA1192965 | 2817 | 265 | 1.604167 | 4.25104255 | Oceanobacter sp. | 2030817 | Bacteria | Bacteria | 124 | 1.41e-30 | NR | PHR97532.1 | 2030817 | g2798 | i0 | 65.3 | 1.10943396226415 | 98 | 20 | 99.6 | 2 | 2 | 265 | 827 | 920 | PHR97532.1 MAG: hypothetical protein COA68_12395 [Oceanobacter sp.] | diamond | 294 | 124 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Oceanospirillales | Oceanospirillaceae | Oceanobacter | Oceanobacter sp. | ||
| 31810790 | 31810790 | PRJNA1192965_P_NODE_1577_length_327_cov_2.539370_g1558_i0 | PRJNA1192965 | 1577 | 327 | 2.53937 | 8.3037399 | Salmonella enterica | 28901 | Bacteria | Bacteria | 189 | 4.2199999999999996e-60 | NR | MDR5387555.1 | 90371 | g1558 | i0 | 81.5 | 0.990825688073395 | 108 | 19 | 99.1 | 1 | 1 | 324 | 10 | 116 | MDR5387555.1 DUF3421 domain-containing protein [Salmonella enterica subsp. enterica serovar Typhimurium] | diamond | 324 | 189 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Salmonella | Salmonella enterica | ||
| 31842235 | 31842235 | PRJNA1192965_P_NODE_5077_length_241_cov_0.916667_g5058_i0 | PRJNA1192965 | 5077 | 241 | 0.916667 | 2.20916747 | Ramlibacter sp. | 1917967 | Bacteria | Bacteria | 48.1 | 4.72e-4 | NR | MDP3761115.1 | 1917967 | g5058 | i0 | 40 | 0.995850622406639 | 80 | 44 | 98.3 | 4 | 237 | 1 | 1369 | 1445 | MDP3761115.1 reverse transcriptase domain-containing protein [Ramlibacter sp.] | diamond | 240 | 48.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Ramlibacter | Ramlibacter sp. | ||
| 31905614 | 31905614 | PRJNA1192965_P_NODE_3037_length_258_cov_1.324324_g3018_i0 | PRJNA1192965 | 3037 | 258 | 1.324324 | 3.41675592 | Sphingomonadaceae bacterium | 1930536 | Bacteria | Bacteria | 111 | 7.870000000000001e-27 | NR | MCC7393650.1 | 1930536 | g3018 | i0 | 62.7 | 0.965116279069767 | 83 | 28 | 96.5 | 1 | 251 | 3 | 213 | 292 | MCC7393650.1 hypothetical protein [Sphingomonadaceae bacterium] | diamond | 249 | 111 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonadaceae bacterium | |||
| 31937186 | 31937186 | PRJNA1192965_P_NODE_2577_length_275_cov_1.212871_g2558_i0 | PRJNA1192965 | 2577 | 275 | 1.212871 | 3.33539525 | Woeseiaceae bacterium | 2026806 | Bacteria | Bacteria | 123 | 1.36e-30 | NR | MCJ7591637.1 | 2026806 | g2558 | i0 | 64.8 | 20.8472727272727 | 91 | 32 | 99.3 | 0 | 275 | 3 | 129 | 219 | MCJ7591637.1 aldehyde dehydrogenase family protein [Woeseiaceae bacterium] | diamond | 5733 | 123 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Woeseiales | Woeseiaceae | Woeseiaceae bacterium | |||
| 31968866 | 31968866 | PRJNA1192965_P_NODE_4158_length_246_cov_0.890173_g4139_i0 | PRJNA1192965 | 4158 | 246 | 0.890173 | 2.18982558 | Sphingobium sp. | 1912891 | Bacteria | Bacteria | 161 | 6.6700000000000004e-49 | NR | MBA4041670.1 | 1912891 | g4139 | i0 | 98.8 | 0.98780487804878 | 81 | 1 | 98.8 | 0 | 3 | 245 | 64 | 144 | MBA4041670.1 phosphoglycerate kinase [Sphingobium sp.] | diamond | 243 | 161 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingobium | Sphingobium sp. | ||
| 32000582 | 32000582 | PRJNA1192965_P_NODE_5058_length_241_cov_1.732143_g5039_i0 | PRJNA1192965 | 5058 | 241 | 1.732143 | 4.17446463 | Gammaproteobacteria bacterium | 1913989 | Bacteria | Bacteria | 59.7 | 3.82e-8 | NR | HFD31961.1 | 1913989 | g5039 | i0 | 59.1 | 1.07053941908714 | 44 | 18 | 54.8 | 0 | 240 | 109 | 485 | 528 | HFD31961.1 hypothetical protein [Gammaproteobacteria bacterium] | diamond | 258 | 59.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Gammaproteobacteria bacterium | |||||
| 32241422 | 32241422 | PRJNA1192965_P_NODE_3778_length_249_cov_0.875000_g3759_i0 | PRJNA1192965 | 3778 | 249 | 0.875 | 2.17875 | Pseudomonadota | 1224 | Bacteria | Bacteria | 59.7 | 4.44e-9 | NR | WP_146714213.1 | 562 | g3759 | i0 | 90.3 | 1.49397590361446 | 31 | 3 | 37.3 | 0 | 2 | 94 | 99 | 129 | WP_146714213.1 porin, partial [Escherichia coli] | diamond | 372 | 59.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 32538711 | 32538711 | PRJNA1192965_P_NODE_239_length_723_cov_1.853846_g222_i0 | PRJNA1192965 | 239 | 723 | 1.853846 | 13.40330658 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 53.9 | 2.12e-4 | NR | MFM2318624.1 | 1977087 | g222 | i0 | 33.9 | 1.4149377593361 | 124 | 64 | 48.1 | 5 | 358 | 11 | 140 | 253 | MFM2318624.1 hypothetical protein [Pseudomonadota bacterium] | diamond | 1023 | 53.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 32664390 | 32664390 | PRJNA1192965_P_NODE_4740_length_243_cov_0.905882_g4721_i0 | PRJNA1192965 | 4740 | 243 | 0.905882 | 2.20129326 | uncultured Sphingomonas sp. | 158754 | Bacteria | Bacteria | 121 | 8.789999999999998e-30 | NR | WP_341204227.1 | 158754 | g4721 | i0 | 98.5 | 0.839506172839506 | 68 | 1 | 84 | 0 | 40 | 243 | 1 | 68 | WP_341204227.1 TonB-dependent receptor [uncultured Sphingomonas sp.] | diamond | 204 | 121 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | uncultured Sphingomonas sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;