RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1192965" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA1192965 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
320562 320562 PRJNA1192965_P_NODE_2641_length_272_cov_1.547739_g2622_i0 PRJNA1192965 2641 272 1.547739 4.20985008 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 133 1.4499999999999998e-37   NR XP_002141581.1 441375 g2622 i0 66.3 11.7242647058824 89 30 98.2 0 267 1 10 98 XP_002141581.1 40S ribosomal protein S18, putative [Cryptosporidium muris RN66] diamond 3189 133 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium muris
320579 320579 PRJNA1192965_P_NODE_5141_length_241_cov_0.916667_g5122_i0 PRJNA1192965 5141 241 0.916667 2.20916747 Porospora cf. gigantea A 2853593 SAR_Eukaryotes SAR_Eukaryotes 105 1.67e-27   NR XP_067808354.1 2853593 g5122 i0 60 0.995850622406639 80 32 99.6 0 1 240 12 91 XP_067808354.1 MAG: uncharacterized protein KVP18_004117 [Porospora cf. gigantea A] diamond 240 105 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Porosporidae Porospora Porospora cf. gigantea A
20721862 20721862 PRJNA1192965_P_NODE_1597_length_325_cov_4.444444_g1578_i0 PRJNA1192965 1597 325 4.444444 14.444443 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 133 3.57e-37   NR XP_953890.1 5874 g1578 i0 62.1 32.7046153846154 103 39 95.1 0 14 322 4 106 XP_953890.1 eukaryotic translation initiation factor (eIF5A) [Theileria annulata] diamond 10629 134 0.992537313432836 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria annulata
26914099 26914099 PRJNA1192965_P_NODE_582_length_487_cov_3.432367_g563_i0 PRJNA1192965 582 487 3.432367 16.71562729 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 199 1.36e-61   NR OEH76901.1 88456 g563 i0 65.2 3.96098562628337 161 56 99.2 0 4 486 33 193 OEH76901.1 ribosomal protein rpl19 [Cyclospora cayetanensis] diamond 1929 199 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
27470747 27470747 PRJNA1192965_P_NODE_1623_length_323_cov_3.864000_g1604_i0 PRJNA1192965 1623 323 3.864 12.48072 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 112 1.64e-29   NR GFE54039.1 5869 g1604 i0 56.3 14.1083591331269 103 44 94.7 1 15 320 5 107 GFE54039.1 60S ribosomal protein L31 [Babesia ovis] diamond 4557 112 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovis
29282695 29282695 PRJNA1192965_P_NODE_5089_length_241_cov_0.916667_g5070_i0 PRJNA1192965 5089 241 0.916667 2.20916747 Cystoisospora suis 483139 SAR_Eukaryotes SAR_Eukaryotes 46.6 3.24e-4   NR XP_067927055.1 483139 g5070 i0 61.3 0.784232365145228 31 11 38.6 1 2 94 77 106 XP_067927055.1 dynein light chain type 1 [Cystoisospora suis] diamond 189 46.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
30735800 30735800 PRJNA1192965_P_NODE_3014_length_259_cov_1.118280_g2995_i0 PRJNA1192965 3014 259 1.11828 2.8963452 Hepatocystis sp. ex Piliocolobus tephrosceles 2600580 SAR_Eukaryotes SAR_Eukaryotes 115 3.0099999999999993e-28   NR VWU50564.1 2600580 g2995 i0 66.3 0.961389961389961 83 28 96.1 0 254 6 291 373 VWU50564.1 S-adenosylmethionine synthetase, putative [Hepatocystis sp. ex Piliocolobus tephrosceles] diamond 249 115 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Hepatocystis Hepatocystis sp. ex Piliocolobus tephrosceles

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;