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contig_metadata

16 rows where analysis = "diamond", bioproject = "PRJNA1188114" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 16 ✖

bioproject 1

  • PRJNA1188114 · 16 ✖

analysis 1

  • diamond · 16 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4146908 4146908 PRJNA1188114_P_NODE_17064_length_163_cov_0.894737_g17012_i0 PRJNA1188114 17064 163 0.894737 1.45842131 Staphylococcus phage vB_SauM_JDF86 3038179 Viruses Viruses 61.6 2.4e-9   NR WFG33963.1 3038179 g17012 i0 49.1 1.04907975460123 57 26 99.4 1 162 1 44 100 WFG33963.1 hypothetical protein F10086_41 [Staphylococcus phage vB_SauM_JDF86] diamond 171 61.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Herelleviridae Baoshanvirus Staphylococcus phage vB_SauM_JDF86
27641202 27641202 PRJNA1188114_P_NODE_15924_length_164_cov_0.886957_g15872_i0 PRJNA1188114 15924 164 0.886957 1.45460948 Caudoviricetes sp. 2832643 Viruses Viruses 78.6 2.98e-15   NR XOQ88409.1 2832643 g15872 i0 72.2 0.98780487804878 54 15 98.8 0 162 1 202 255 XOQ88409.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 162 78.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
27956818 27956818 PRJNA1188114_P_NODE_19445_length_161_cov_0.910714_g19393_i0 PRJNA1188114 19445 161 0.910714 1.46624954 Achromobacter phage JWF 1589748 Viruses Viruses 44.3 0.00315   NR YP_009224008.1 1589748 g19393 i0 46.9 0.91304347826087 49 26 91.3 0 152 6 3 51 YP_009224008.1 hypothetical protein AXJ13_gp002 [Achromobacter phage JWF] diamond 147 44.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Achromobacter phage JWF
28177532 28177532 PRJNA1188114_P_NODE_18346_length_162_cov_0.902655_g18294_i0 PRJNA1188114 18346 162 0.902655 1.4623011 Caudoviricetes sp. 2832643 Viruses Viruses 78.2 1.12e-16   NR XOR51484.1 2832643 g18294 i0 73.6 0.981481481481482 53 14 98.1 0 2 160 70 122 XOR51484.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 159 78.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
29333474 29333474 PRJNA1188114_P_NODE_15389_length_164_cov_1.478261_g15337_i0 PRJNA1188114 15389 164 1.478261 2.42434804 Nipunavirus 1982239 Viruses Viruses 91.7 7.44e-20   NR YP_009603583.1 1175654 g15337 i0 79.6 2.96341463414634 54 11 98.8 0 1 162 148 201 YP_009603583.1 DNA polymerase [Pseudomonas phage PaMx25] diamond 486 91.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Nipunavirus Nipunavirus PaMx25
29566925 29566925 PRJNA1188114_P_NODE_14230_length_165_cov_1.577586_g14178_i0 PRJNA1188114 14230 165 1.577586 2.6030169 Bacteriophage sp. 38018 Viruses Viruses 55.8 3e-7   NR UVX43097.1 38018 g14178 i0 52 1.76363636363636 50 24 90.9 0 3 152 203 252 UVX43097.1 MAG: zinc-binding loop region of homing endonuclease [Bacteriophage sp.] diamond 291 55.8 1 Viruses               Bacteriophage sp.
29566928 29566928 PRJNA1188114_P_NODE_19010_length_161_cov_1.589286_g18958_i0 PRJNA1188114 19010 161 1.589286 2.55875046 Sea turtle neural virus 1 3112944 Viruses Viruses 48.5 1.11e-4   NR WET19891.1 3112944 g18958 i0 52.5 0.745341614906832 40 19 74.5 0 2 121 458 497 WET19891.1 MAG: nucleoprotein [Sea turtle neural virus 1] diamond 120 48.5 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Sea turtle neural virus 1
30040768 30040768 PRJNA1188114_P_NODE_7311_length_186_cov_1.489051_g7259_i0 PRJNA1188114 7311 186 1.489051 2.76963486 Caudoviricetes sp. 2832643 Viruses Viruses 118 1.14e-30   NR XOR59523.1 2832643 g7259 i0 91.8 0.983870967741935 61 5 98.4 0 3 185 140 200 XOR59523.1 MAG: putative phage protein [Caudoviricetes sp.] diamond 183 118 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
30451736 30451736 PRJNA1188114_P_NODE_18793_length_162_cov_0.902655_g18741_i0 PRJNA1188114 18793 162 0.902655 1.4623011 Staphylococcus phage Alsa_1 3076561 Viruses Viruses 59.3 8.89e-10   NR WNM50486.1 3076561 g18741 i0 56 0.925925925925926 50 21 92.6 1 4 153 1 49 WNM50486.1 hypothetical protein Alsa1_CDS0136 [Staphylococcus phage Alsa_1] diamond 150 59.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Herelleviridae   Staphylococcus phage Alsa_1
30596782 30596782 PRJNA1188114_P_NODE_11573_length_169_cov_1.275000_g11521_i0 PRJNA1188114 11573 169 1.275 2.15475 Pradovirus 1985733 Viruses Viruses 52 6.67e-6   NR YP_009275435.1 1784979 g11521 i0 43.8 4.27810650887574 48 27 85.2 0 145 2 4 51 YP_009275435.1 DNA primase [Xanthomonas phage f20-Xaj] diamond 723 52 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Autographivirales Autonotataviridae Pradovirus Pradovirus f20
31273079 31273079 PRJNA1188114_P_NODE_14835_length_165_cov_0.879310_g14783_i0 PRJNA1188114 14835 165 0.87931 1.4508615 Caudoviricetes sp. 2832643 Viruses Viruses 43.1 0.00956   NR XOS63369.1 2832643 g14783 i0 51 0.927272727272727 51 25 92.7 0 157 5 1080 1130 XOS63369.1 MAG: hypothetical protein MSP0629_1, partial [Caudoviricetes sp.] diamond 153 43.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
31715859 31715859 PRJNA1188114_P_NODE_7197_length_187_cov_1.108696_g7145_i0 PRJNA1188114 7197 187 1.108696 2.07326152 Caudoviricetes sp. 2832643 Viruses Viruses 124 4.279999999999999e-34   NR XOR59517.1 2832643 g7145 i0 95.2 0.994652406417112 62 3 99.5 0 187 2 144 205 XOR59517.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 186 124 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
31797942 31797942 PRJNA1188114_P_NODE_357_length_730_cov_2.767988_g310_i0 PRJNA1188114 357 730 2.767988 20.2063124 Gammaretrovirus 153135 Viruses Viruses 506 2.39e-164   NR ARB03489.1 11786 g310 i0 98.8 10.9849315068493 243 3 99.9 0 730 2 747 989 ARB03489.1 putative gag-pro-pol polyprotein [Murine leukemia virus] diamond 8019 511 0.990215264187867 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
32158928 32158928 PRJNA1188114_P_NODE_13798_length_166_cov_0.871795_g13746_i0 PRJNA1188114 13798 166 0.871795 1.4471797 Caudoviricetes sp. 2832643 Viruses Viruses 96.7 1.93e-23   NR XOR59527.1 2832643 g13746 i0 78.2 0.993975903614458 55 12 99.4 0 166 2 60 114 XOR59527.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 165 96.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
32317307 32317307 PRJNA1188114_P_NODE_1299_length_377_cov_1.643293_g1247_i0 PRJNA1188114 1299 377 1.643293 6.19521461 Moloney murine leukemia virus 11801 Viruses Viruses 256 3.98e-76   NR NP_057933.2 11801 g1247 i0 100 4.97347480106101 125 0 99.5 0 3 377 1048 1172 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 1875 256 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
32348876 32348876 PRJNA1188114_P_NODE_6579_length_189_cov_1.442857_g6527_i0 PRJNA1188114 6579 189 1.442857 2.72699973 Acinetobacter phage Presley 1406780 Viruses Viruses 108 1.68e-25   NR YP_009007656.1 1406780 g6527 i0 73 1 63 17 100 0 189 1 52 114 YP_009007656.1 portal protein [Acinetobacter phage Presley] diamond 189 108 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Schitoviridae Presleyvirus Presleyvirus presley

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;