RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1188114" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1188114 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27420267 27420267 PRJNA1188114_P_NODE_6583_length_189_cov_1.442857_g6531_i0 PRJNA1188114 6583 189 1.442857 2.72699973 Actinostola sp. cb2 3060491 Cnidaria other_Eukaryota 47.4 4.33e-4   NR KAK3742060.1 3060491 g6531 i0 35.7 1.61904761904762 56 36 88.9 0 16 183 353 408 KAK3742060.1 hypothetical protein QZH41_015740, partial [Actinostola sp. cb2023] diamond 306 47.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actinostolidae Actinostola Actinostola sp. cb2023
28462170 28462170 PRJNA1188114_P_NODE_8986_length_179_cov_1.892308_g8934_i0 PRJNA1188114 8986 179 1.892308 3.38723132 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 68.6 1.25e-11   NR XP_028517204.1 2652724 g8934 i0 56.4 5.54748603351955 55 24 92.2 0 179 15 175 229 XP_028517204.1 transmembrane protease serine 9 isoform X2 [Exaiptasia diaphana] diamond 993 68.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;