RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1186363" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1186363 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27767508 27767508 PRJNA1186363_P_NODE_4_length_5539_cov_6.688621_g3_i0 PRJNA1186363 4 5539 6.688621 370.48271719 Macrobrachium rosenbergii picorna-like virus 4 3132542 Viruses Viruses 2370 0   NR WWZ85593.1 3132542 g3 i0 64.5 0.997653005957754 1842 551 94.9 19 2 5260 1154 2981 WWZ85593.1 RNA-dependent RNA polymerase [Macrobrachium rosenbergii picorna-like virus 4] diamond 5526 2370 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Macrobrachium rosenbergii picorna-like virus 4
27893446 27893446 PRJNA1186363_P_NODE_305_length_2352_cov_2.802984_g235_i0 PRJNA1186363 305 2352 2.802984 65.92618368 Macrobrachium rosenbergii picorna-like virus 4 3132542 Viruses Viruses 884 7.320000000000001e-289   NR WWZ85593.1 3132542 g235 i0 56.6 1.02040816326531 800 322 99.9 6 2 2350 330 1121 WWZ85593.1 RNA-dependent RNA polymerase [Macrobrachium rosenbergii picorna-like virus 4] diamond 2400 884 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Macrobrachium rosenbergii picorna-like virus 4
32127329 32127329 PRJNA1186363_P_NODE_6418_length_839_cov_1.593995_g5664_i0 PRJNA1186363 6418 839 1.593995 13.37361805 Macrobrachium rosenbergii picorna-like virus 4 3132542 Viruses Viruses 242 1.12e-68   NR WWZ85593.1 3132542 g5664 i0 47.1 1.00119189511323 280 125 99.4 4 3 836 72 330 WWZ85593.1 RNA-dependent RNA polymerase [Macrobrachium rosenbergii picorna-like virus 4] diamond 840 242 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Macrobrachium rosenbergii picorna-like virus 4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;