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contig_metadata

22 rows where analysis = "diamond", bioproject = "PRJNA1182301" and tax_phylum = "Deinococcota"

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tax_superkingdom 1

tax_phylum 1

  • Deinococcota · 22 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1182301 · 22 ✖

analysis 1

  • diamond · 22 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4145831 4145831 PRJNA1182301_P_NODE_49944_length_250_cov_1.666667_g49819_i0 PRJNA1182301 49944 250 1.666667 4.1666675 Deinococcus 1298 Bacteria Bacteria 108 1.84e-25   NR WP_291424698.1 47478 g49819 i0 77.5 2.604 71 16 85.2 0 248 36 297 367 WP_291424698.1 2-oxo acid dehydrogenase subunit E2 [Deinococcus sp.] diamond 651 108 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp.
5421998 5421998 PRJNA1182301_P_NODE_49245_length_251_cov_0.865169_g49120_i0 PRJNA1182301 49245 251 0.865169 2.17157419 Deinococcus sp. HSC-46F16 2910968 Bacteria Bacteria 157 8.69e-44   NR WP_253581841.1 2910968 g49120 i0 96.4 0.99203187250996006 83 3 99.2 0 2 250 407 489 WP_253581841.1 ATP-binding protein [Deinococcus sp. HSC-46F16] diamond 249 157 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. HSC-46F16
19444294 19444294 PRJNA1182301_P_NODE_23496_length_284_cov_1.459716_g23371_i0 PRJNA1182301 23496 284 1.459716 4.14559344 Deinococcus piscis 394230 Bacteria Bacteria 164 2.85e-48   NR WP_189641819.1 394230 g23371 i0 83 4.96478873239437 94 16 99.3 0 284 3 124 217 WP_189641819.1 serine O-acetyltransferase [Deinococcus piscis] diamond 1410 164 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus piscis
19444574 19444574 PRJNA1182301_P_NODE_34676_length_269_cov_1.505102_g34551_i0 PRJNA1182301 34676 269 1.505102 4.04872438 Truepera radiovictrix 332249 Bacteria Bacteria 127 1.2099999999999999e-31   NR WP_013177336.1 332249 g34551 i0 74.2 0.992565055762082 89 23 99.3 0 3 269 515 603 WP_013177336.1 DNA mismatch repair protein MutS [Truepera radiovictrix] diamond 267 127 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera radiovictrix
20720710 20720710 PRJNA1182301_P_NODE_68457_length_209_cov_4.220588_g68332_i0 PRJNA1182301 68457 209 4.220588 8.82102892 Deinococcus taklimakanensis 536443 Bacteria Bacteria 136 2.24e-37   NR WP_386842682.1 536443 g68332 i0 97.1 0.990430622009569 69 2 99 0 209 3 106 174 WP_386842682.1 ferrochelatase [Deinococcus taklimakanensis] diamond 207 136 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus taklimakanensis
27230211 27230211 PRJNA1182301_P_NODE_24223_length_283_cov_1.466667_g24098_i0 PRJNA1182301 24223 283 1.466667 4.15066761 uncultured Truepera sp. 543023 Bacteria Bacteria 185 3.1399999999999992e-55   NR CAA9580279.1 543023 g24098 i0 94.7 0.996466431095406 94 5 99.6 0 2 283 52 145 CAA9580279.1 MAG: ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines), partial [uncultured Truepera sp.] diamond 282 185 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera uncultured Truepera sp.
27261991 27261991 PRJNA1182301_P_NODE_42083_length_259_cov_1.736559_g41958_i0 PRJNA1182301 42083 259 1.736559 4.49768781 Deinococcus cavernae 2320857 Bacteria Bacteria 166 1.35e-49   NR WP_119763317.1 2320857 g41958 i0 100 0.984555984555985 85 0 98.5 0 257 3 155 239 WP_119763317.1 DUF4388 domain-containing protein [Deinococcus cavernae] diamond 255 166 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus cavernae
27261993 27261993 PRJNA1182301_P_NODE_45643_length_254_cov_3.000000_g45518_i0 PRJNA1182301 45643 254 3 7.62 Deinococcota bacterium 1913990 Bacteria Bacteria 112 3.0099999999999993e-28   NR MDQ3458562.1 1913990 g45518 i0 67.5 0.980314960629921 83 27 98 0 253 5 143 225 MDQ3458562.1 FAD-dependent oxidoreductase [Deinococcota bacterium] diamond 249 112 1 Bacteria   Thermotogati Deinococcota         Deinococcota bacterium
27514624 27514624 PRJNA1182301_P_NODE_19803_length_289_cov_1.736111_g19678_i0 PRJNA1182301 19803 289 1.736111 5.01736079 Truepera radiovictrix 332249 Bacteria Bacteria 55.1 2.6e-6   NR WP_013177823.1 332249 g19678 i0 50 0.602076124567474 58 29 60.2 0 194 21 257 314 WP_013177823.1 hypothetical protein [Truepera radiovictrix] diamond 174 55.1 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera radiovictrix
28462016 28462016 PRJNA1182301_P_NODE_23766_length_283_cov_3.114286_g23641_i0 PRJNA1182301 23766 283 3.114286 8.81342938 Deinococcus sp. YIM 134 47478 Bacteria Bacteria 82 2.35e-18   NR WP_331823796.1 3118910 g23641 i0 100 0.424028268551237 40 0 42.4 0 120 1 1 40 WP_331823796.1 hypothetical protein [Deinococcus sp. YIM 134068] diamond 120 82 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus lichenicola
28872210 28872210 PRJNA1182301_P_NODE_34548_length_269_cov_1.571429_g34423_i0 PRJNA1182301 34548 269 1.571429 4.22714401 Deinococcus terrestris 2651870 Bacteria Bacteria 142 6.489999999999999e-37   NR WP_152869361.1 2651870 g34423 i0 84.3 0.992565055762082 89 14 99.3 0 2 268 478 566 WP_152869361.1 DEAD/DEAH box helicase family protein [Deinococcus terrestris] diamond 267 142 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus terrestris
29756197 29756197 PRJNA1182301_P_NODE_21211_length_287_cov_1.789720_g21086_i0 PRJNA1182301 21211 287 1.78972 5.1364964 uncultured Truepera sp. 543023 Bacteria Bacteria 146 9.21e-41   NR CAA9561180.1 543023 g21086 i0 76.6 0.982578397212544 94 22 98.3 0 283 2 30 123 CAA9561180.1 MAG: Inosose dehydratase [uncultured Truepera sp.] diamond 282 146 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera uncultured Truepera sp.
30198360 30198360 PRJNA1182301_P_NODE_25012_length_282_cov_1.454545_g24887_i0 PRJNA1182301 25012 282 1.454545 4.1018169 Deinococcus soli (ex Cha et al. 2 1309411 Bacteria Bacteria 109 4.660000000000001e-27   NR WP_188846010.1 1309411 g24887 i0 66.2 1.4468085106383 68 23 72.3 0 2 205 112 179 WP_188846010.1 hypothetical protein [Deinococcus soli (ex Cha et al. 2016)] diamond 408 109 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus soli (ex Cha et al. 2016)
30830460 30830460 PRJNA1182301_P_NODE_57914_length_245_cov_0.895349_g57789_i0 PRJNA1182301 57914 245 0.895349 2.19360505 Deinococcus sp. KNUC121 47478 Bacteria Bacteria 96.7 4.08e-21   NR WP_239048202.1 2917691 g57789 i0 64.1 1.9469387755102 78 28 95.5 0 1 234 696 773 WP_239048202.1 glycosyltransferase [Deinococcus sp. KNUC1210] diamond 477 96.7 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. KNUC1210
30925544 30925544 PRJNA1182301_P_NODE_59394_length_244_cov_0.900585_g59269_i0 PRJNA1182301 59394 244 0.900585 2.1974274 Deinococcus sp. NW-56 2080419 Bacteria Bacteria 53.5 5.67e-6   NR WP_104990125.1 2080419 g59269 i0 80.6 0.823770491803279 36 7 44.3 0 5 112 318 353 WP_104990125.1 LLM class flavin-dependent oxidoreductase [Deinococcus sp. NW-56] diamond 201 53.5 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. NW-56
31051964 31051964 PRJNA1182301_P_NODE_14595_length_310_cov_2.890295_g14470_i0 PRJNA1182301 14595 310 2.890295 8.9599145 Deinococcus maricopensis 309887 Bacteria Bacteria 89.4 3.95e-20   NR WP_013558144.1 309887 g14470 i0 89.8 0.948387096774194 49 5 47.4 0 148 2 38 86 WP_013558144.1 transcriptional regulator NrdR [Deinococcus maricopensis] diamond 294 89.4 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus maricopensis
31083320 31083320 PRJNA1182301_P_NODE_52575_length_248_cov_2.120000_g52450_i0 PRJNA1182301 52575 248 2.12 5.2576 Deinococcus phoenicis 1476583 Bacteria Bacteria 94.7 2.06e-20   NR WP_034359315.1 1476583 g52450 i0 67.1 0.991935483870968 82 27 99.2 0 246 1 737 818 WP_034359315.1 hypothetical protein [Deinococcus phoenicis] diamond 246 94.7 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus phoenicis
31526102 31526102 PRJNA1182301_P_NODE_53656_length_248_cov_0.880000_g53531_i0 PRJNA1182301 53656 248 0.88 2.1824 Deinococcus hohokamensis 309883 Bacteria Bacteria 77 1.57e-14   NR WP_380063303.1 309883 g53531 i0 46.3 1.98387096774194 82 44 99.2 0 246 1 40 121 WP_380063303.1 hypothetical protein [Deinococcus hohokamensis] diamond 492 77 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus hohokamensis
31987891 31987891 PRJNA1182301_P_NODE_50058_length_250_cov_1.389831_g49933_i0 PRJNA1182301 50058 250 1.389831 3.4745775 Bacteria 2 Bacteria Bacteria 170 5.06e-47   NR 1TAQ_A 271 g49933 i0 100 3.972 83 0 99.6 0 249 1 235 317 1TAQ_A Chain A, TAQ DNA POLYMERASE [Thermus aquaticus] diamond 993 170 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus aquaticus
32127211 32127211 PRJNA1182301_P_NODE_33498_length_270_cov_2.269036_g33373_i0 PRJNA1182301 33498 270 2.269036 6.1263972 Deinococcus sp. Marseille-Q64 47478 Bacteria Bacteria 120 1.31e-30   NR WP_261664278.1 2969223 g33373 i0 69.3 0.977777777777778 88 27 97.8 0 5 268 217 304 WP_261664278.1 peptidylprolyl isomerase [Deinococcus sp. Marseille-Q6407] diamond 264 120 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. Marseille-Q6407
32158822 32158822 PRJNA1182301_P_NODE_59418_length_244_cov_0.888889_g59293_i0 PRJNA1182301 59418 244 0.888889 2.16888916 Deinococcus aetherius 200252 Bacteria Bacteria 149 8.26e-44   NR WP_264776233.1 200252 g59293 i0 83.8 0.983606557377049 80 13 98.4 0 243 4 26 105 WP_264776233.1 AAA family ATPase [Deinococcus aetherius] diamond 240 149 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus aetherius
32506963 32506963 PRJNA1182301_P_NODE_35919_length_267_cov_1.953608_g35794_i0 PRJNA1182301 35919 267 1.953608 5.21613336 Trueperaceae bacterium 2026798 Bacteria Bacteria 68.9 3.59e-13   NR HEX7022878.1 2026798 g35794 i0 50 0.764044943820225 68 34 76.4 0 30 233 1 68 HEX7022878.1 hypothetical protein [Trueperaceae bacterium] diamond 204 68.9 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;