contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA1182301" and tax_phylum = "Apicomplexa"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28872219 | 28872219 | PRJNA1182301_P_NODE_60988_length_242_cov_2.538462_g60863_i0 | PRJNA1182301 | 60988 | 242 | 2.538462 | 6.14307804 | Gregarina niphandrodes | 110365 | SAR_Eukaryotes | SAR_Eukaryotes | 55.8 | 3.67e-7 | NR | XP_011134210.1 | 110365 | g60863 | i0 | 50.9 | 1.31404958677686 | 53 | 26 | 65.7 | 0 | 240 | 82 | 25 | 77 | XP_011134210.1 hypothetical protein GNI_018460 [Gregarina niphandrodes] | diamond | 318 | 55.8 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eugregarinorida | Gregarinidae | Gregarina | Gregarina niphandrodes | ||
| 28967151 | 28967151 | PRJNA1182301_P_NODE_41128_length_260_cov_2.422460_g41003_i0 | PRJNA1182301 | 41128 | 260 | 2.42246 | 6.298396 | Gregarina niphandrodes | 110365 | SAR_Eukaryotes | SAR_Eukaryotes | 47.4 | 9.51e-4 | NR | XP_011129077.1 | 110365 | g41003 | i0 | 39.1 | 0.738461538461539 | 64 | 34 | 70.4 | 2 | 216 | 34 | 7 | 68 | XP_011129077.1 hypothetical protein GNI_027180, partial [Gregarina niphandrodes] | diamond | 192 | 47.4 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eugregarinorida | Gregarinidae | Gregarina | Gregarina niphandrodes | ||
| 30546156 | 30546156 | PRJNA1182301_P_NODE_28653_length_277_cov_1.426471_g28528_i0 | PRJNA1182301 | 28653 | 277 | 1.426471 | 3.95132467 | Gregarina niphandrodes | 110365 | SAR_Eukaryotes | SAR_Eukaryotes | 77.8 | 2.71e-14 | NR | XP_011129760.1 | 110365 | g28528 | i0 | 51.1 | 2.03610108303249 | 94 | 43 | 99.6 | 3 | 2 | 277 | 840 | 932 | XP_011129760.1 piwi domain protein [Gregarina niphandrodes] | diamond | 564 | 77.8 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eugregarinorida | Gregarinidae | Gregarina | Gregarina niphandrodes | ||
| 31177794 | 31177794 | PRJNA1182301_P_NODE_56115_length_246_cov_0.890173_g55990_i0 | PRJNA1182301 | 56115 | 246 | 0.890173 | 2.18982558 | Gregarina niphandrodes | 110365 | SAR_Eukaryotes | SAR_Eukaryotes | 62 | 4.68e-9 | NR | XP_011129200.1 | 110365 | g55990 | i0 | 60.4 | 0.646341463414634 | 53 | 20 | 63.4 | 1 | 3 | 158 | 53 | 105 | XP_011129200.1 putative RNA-binding nova protein, partial [Gregarina niphandrodes] | diamond | 159 | 62 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eugregarinorida | Gregarinidae | Gregarina | Gregarina niphandrodes | ||
| 32538564 | 32538564 | PRJNA1182301_P_NODE_28279_length_277_cov_2.215686_g28154_i0 | PRJNA1182301 | 28279 | 277 | 2.215686 | 6.13745022 | Gregarina niphandrodes | 110365 | SAR_Eukaryotes | SAR_Eukaryotes | 81.3 | 1.6e-15 | NR | XP_011132848.1 | 110365 | g28154 | i0 | 44.9 | 0.963898916967509 | 89 | 47 | 96.4 | 1 | 9 | 275 | 1226 | 1312 | XP_011132848.1 RNA-directed DNA polymerase [Gregarina niphandrodes] | diamond | 267 | 81.3 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eugregarinorida | Gregarinidae | Gregarina | Gregarina niphandrodes |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;