RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1180292" and tax_phylum = "Bryozoa"

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tax_superkingdom 1

tax_phylum 1

  • Bryozoa · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1180292 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28493475 28493475 PRJNA1180292_P_NODE_2687_length_414_cov_3.038123_g2555_i0 PRJNA1180292 2687 414 3.038123 12.57782922 Watersipora subatra 2589382 Bryozoa other_Eukaryota 189 6.130000000000001e-59   NR XP_067935620.1 2589382 g2555 i0 72.6 4.23913043478261 117 32 84.8 0 63 413 1 117 XP_067935620.1 large ribosomal subunit protein uL11-like [Watersipora subatra] diamond 1755 189 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Watersiporidae Watersipora Watersipora subatra
29933561 29933561 PRJNA1180292_P_NODE_4251_length_335_cov_1.610687_g4119_i0 PRJNA1180292 4251 335 1.610687 5.3958014500000004 Metazoa 33208 Bryozoa other_Eukaryota 73.9 2.77e-13   NR KAF6033986.1 10212 g4119 i0 46.7 1.63880597014925 92 47 80.6 2 274 5 93 184 KAF6033986.1 hypothetical protein EB796_007708 [Bugula neritina] diamond 549 73.9 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Bugulidae Bugula Bugula neritina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;