RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

32 rows where analysis = "diamond", bioproject = "PRJNA1180292" and tax_phylum = "Bacillota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Bacillota · 32 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1180292 · 32 ✖

analysis 1

  • diamond · 32 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9245726 9245726 PRJNA1180292_P_NODE_12708_length_243_cov_0.917647_g12576_i0 PRJNA1180292 12708 243 0.917647 2.22988221 Anaerovoracaceae bacterium 3030912 Bacteria Bacteria 115 3.37e-30   NR MFA7462372.1 3030912 g12576 i0 63.9 1.76543209876543 72 26 88.9 0 223 8 105 176 MFA7462372.1 DUF5565 family protein [Anaerovoracaceae bacterium] diamond 429 115 1 Bacteria   Bacillati Bacillota Clostridia Peptostreptococcales Anaerovoracaceae   Anaerovoracaceae bacterium
26660410 26660410 PRJNA1180292_P_NODE_12861_length_242_cov_0.923077_g12729_i0 PRJNA1180292 12861 242 0.923077 2.23384634 Pseudoflavonifractor phocaeensis 1870988 Bacteria Bacteria 172 1.11e-50   NR WP_235380672.1 1870988 g12729 i0 100 0.991735537190083 80 0 99.2 0 242 3 241 320 WP_235380672.1 aldo/keto reductase [Pseudoflavonifractor phocaeensis] diamond 240 172 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae Pseudoflavonifractor Pseudoflavonifractor phocaeensis
26913932 26913932 PRJNA1180292_P_NODE_13162_length_242_cov_0.881657_g13030_i0 PRJNA1180292 13162 242 0.881657 2.13360994 Clostridia bacterium 2044939 Bacteria Bacteria 74.3 2.11e-13   NR MDO5325064.1 2044939 g13030 i0 94.6 0.91735537190082606 37 2 45.9 0 111 1 1 37 MDO5325064.1 UDP-glucose--hexose-1-phosphate uridylyltransferase [Clostridia bacterium] diamond 222 74.3 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
26933208 26933208 PRJNA1180292_P_NODE_7962_length_253_cov_0.866667_g7830_i0 PRJNA1180292 7962 253 0.866667 2.19266751 Clostridia 186801 Bacteria Bacteria 123 3.47e-31   NR WP_367721833.1 1492 g7830 i0 66.7 10.9565217391304 84 28 99.6 0 253 2 242 325 WP_367721833.1 transposase, partial [Clostridium butyricum] diamond 2772 123 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium butyricum
27546192 27546192 PRJNA1180292_P_NODE_9544_length_249_cov_1.772727_g9412_i0 PRJNA1180292 9544 249 1.772727 4.41409023 Bacilli bacterium 1903720 Bacteria Bacteria 43.9 0.0153   NR MBR1416722.1 1903720 g9412 i0 34 0.63855421686747 53 32 63.9 1 41 199 79 128 MBR1416722.1 putative manganese-dependent inorganic diphosphatase [Bacilli bacterium] diamond 159 43.9 1 Bacteria   Bacillati Bacillota Bacilli       Bacilli bacterium
28209036 28209036 PRJNA1180292_P_NODE_12066_length_244_cov_0.912281_g11934_i0 PRJNA1180292 12066 244 0.912281 2.22596564 Clostridiales bacterium 1898207 Bacteria Bacteria 60.1 4.36e-9   NR MCL1848818.1 1898207 g11934 i0 75 1.09426229508197 44 11 54.1 0 109 240 1 44 MCL1848818.1 50S ribosomal protein L15 [Clostridiales bacterium] diamond 267 60.1 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales     Clostridiales bacterium
28259733 28259733 PRJNA1180292_P_NODE_13226_length_235_cov_2.246914_g13094_i0 PRJNA1180292 13226 235 2.246914 5.2802479 Bacteria 2 Bacteria Bacteria 81.3 1.11e-16   NR MEW6107381.1 1879010 g13094 i0 50 4.87659574468085 76 38 97 0 235 8 99 174 MEW6107381.1 CADD family putative folate metabolism protein [Bacillota bacterium] diamond 1146 82 0.991463414634146 Bacteria   Bacillati Bacillota         Bacillota bacterium
28619856 28619856 PRJNA1180292_P_NODE_10267_length_248_cov_0.891429_g10135_i0 PRJNA1180292 10267 248 0.891429 2.21074392 Clostridia bacterium 2044939 Bacteria Bacteria 52.8 4.44e-7   NR MDD4109925.1 2044939 g10135 i0 47.4 0.689516129032258 57 29 67.7 1 39 206 1 57 MDD4109925.1 hypothetical protein [Clostridia bacterium] diamond 171 52.8 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
28683000 28683000 PRJNA1180292_P_NODE_12087_length_244_cov_0.912281_g11955_i0 PRJNA1180292 12087 244 0.912281 2.22596564 Oscillospiraceae bacterium 2485925 Bacteria Bacteria 52 2.03e-5   NR MBE6626058.1 2485925 g11955 i0 40.6 1.73360655737705 69 41 84.8 0 23 229 21 89 MBE6626058.1 MBL fold metallo-hydrolase [Oscillospiraceae bacterium] diamond 423 52 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae   Oscillospiraceae bacterium
28872196 28872196 PRJNA1180292_P_NODE_7788_length_253_cov_1.138889_g7656_i0 PRJNA1180292 7788 253 1.138889 2.88138917 Clostridia bacterium 2044939 Bacteria Bacteria 42.7 0.0178   NR MBP3436387.1 2044939 g7656 i0 67.6 0.403162055335968 34 11 40.3 0 9 110 104 137 MBP3436387.1 Hsp20/alpha crystallin family protein [Clostridia bacterium] diamond 102 42.7 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
29219732 29219732 PRJNA1180292_P_NODE_6389_length_278_cov_1.521951_g6257_i0 PRJNA1180292 6389 278 1.521951 4.23102378 Fictibacillus nanhaiensis 742169 Bacteria Bacteria 142 4.69e-39   NR WP_222462241.1 742169 g6257 i0 74.4 5.81654676258993 90 23 97.1 0 4 273 138 227 WP_222462241.1 NADPH dehydrogenase NamA [Fictibacillus nanhaiensis] diamond 1617 142 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Fictibacillaceae Fictibacillus Fictibacillus nanhaiensis
29471872 29471872 PRJNA1180292_P_NODE_11130_length_246_cov_0.901734_g10998_i0 PRJNA1180292 11130 246 0.901734 2.21826564 Oscillospiraceae bacterium 2485925 Bacteria Bacteria 135 9.269999999999999e-35   NR HNX13799.1 2485925 g10998 i0 86.4 1.97560975609756 81 11 98.8 0 2 244 66 146 HNX13799.1 cation-translocating P-type ATPase [Oscillospiraceae bacterium] diamond 486 135 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae   Oscillospiraceae bacterium
29756179 29756179 PRJNA1180292_P_NODE_10671_length_247_cov_0.896552_g10539_i0 PRJNA1180292 10671 247 0.896552 2.21448344 Clostridiales bacterium 1898207 Bacteria Bacteria 107 9.24e-26   NR MCD7797269.1 1898207 g10539 i0 85.2 0.740890688259109 61 9 74.1 0 3 185 308 368 MCD7797269.1 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit [Clostridiales bacterium] diamond 183 107 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales     Clostridiales bacterium
29870217 29870217 PRJNA1180292_P_NODE_8551_length_252_cov_0.871508_g8419_i0 PRJNA1180292 8551 252 0.871508 2.19620016 FCB group 1783270 Bacteria Bacteria 44.3 0.0116   NR WP_139125126.1 1305675 g8419 i0 38.8 2.4047619047619 67 39 77.4 1 26 220 148 214 WP_139125126.1 sugar ABC transporter ATP-binding protein [Bacillus solimangrovi] diamond 606 44.7 0.991051454138702 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Bacillus Bacillus solimangrovi
30059614 30059614 PRJNA1180292_P_NODE_3591_length_361_cov_1.625000_g3459_i0 PRJNA1180292 3591 361 1.625 5.86625 Bacteria 2 Bacteria Bacteria 145 8.689999999999999e-40   NR MBQ6371378.1 1879010 g3459 i0 60.5 2.78393351800554 114 45 94.7 0 359 18 224 337 MBQ6371378.1 UDP-glucose 4-epimerase GalE [Bacillota bacterium] diamond 1005 145 1 Bacteria   Bacillati Bacillota         Bacillota bacterium
30072116 30072116 PRJNA1180292_P_NODE_7052_length_266_cov_1.279793_g6920_i0 PRJNA1180292 7052 266 1.279793 3.40424938 Lachnospira sp. 2049031 Bacteria Bacteria 130 2.62e-36   NR MBP8836266.1 2049031 g6920 i0 97 0.744360902255639 66 2 74.4 0 198 1 1 66 MBP8836266.1 extracellular solute-binding protein [Lachnospira sp.] diamond 198 130 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnospira Lachnospira sp.
30217656 30217656 PRJNA1180292_P_NODE_10092_length_248_cov_0.891429_g9960_i0 PRJNA1180292 10092 248 0.891429 2.21074392 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 134 2.0899999999999997e-35   NR WP_043070537.1 47500 g9960 i0 72 10.7903225806452 82 23 99.2 0 248 3 363 444 WP_043070537.1 aspartate aminotransferase family protein [Aneurinibacillus migulanus] diamond 2676 134 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Aneurinibacillus Aneurinibacillus migulanus
30325518 30325518 PRJNA1180292_P_NODE_7872_length_253_cov_0.866667_g7740_i0 PRJNA1180292 7872 253 0.866667 2.19266751 Bacillota bacterium 1879010 Bacteria Bacteria 138 1.2e-35   NR HWI56019.1 1879010 g7740 i0 79.8 0.99604743083004 84 17 99.6 0 2 253 453 536 HWI56019.1 lamin tail domain-containing protein [Bacillota bacterium] diamond 252 138 1 Bacteria   Bacillati Bacillota         Bacillota bacterium
30388585 30388585 PRJNA1180292_P_NODE_8633_length_252_cov_0.871508_g8501_i0 PRJNA1180292 8633 252 0.871508 2.19620016 Thermicanus aegyptius 94009 Bacteria Bacteria 160 4.38e-46   NR WP_028986758.1 94009 g8501 i0 93.9 0.976190476190476 82 5 97.6 0 3 248 57 138 WP_028986758.1 hydrogenase formation protein HypD [Thermicanus aegyptius] diamond 246 160 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillales Family X. Incertae Sedis Thermicanus Thermicanus aegyptius
30577496 30577496 PRJNA1180292_P_NODE_12673_length_243_cov_0.917647_g12541_i0 PRJNA1180292 12673 243 0.917647 2.22988221 Clostridia bacterium 2044939 Bacteria Bacteria 125 5.14e-33   NR HYG33961.1 2044939 g12541 i0 73.8 1.97530864197531 80 21 98.8 0 243 4 127 206 HYG33961.1 N-acetyltransferase [Clostridia bacterium] diamond 480 125 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
30640774 30640774 PRJNA1180292_P_NODE_12513_length_243_cov_0.917647_g12381_i0 PRJNA1180292 12513 243 0.917647 2.22988221 Clostridia bacterium 2044939 Bacteria Bacteria 137 4.36e-36   NR MDD7351733.1 2044939 g12381 i0 96.3 0.987654320987654 80 3 98.8 0 241 2 163 242 MDD7351733.1 MATE family efflux transporter [Clostridia bacterium] diamond 240 137 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
30976148 30976148 PRJNA1180292_P_NODE_8734_length_251_cov_0.876404_g8602_i0 PRJNA1180292 8734 251 0.876404 2.19977404 Pseudoflavonifractor 1017280 Bacteria Bacteria 79.7 4.05e-17   NR WP_235370031.1 1870988 g8602 i0 93 1.01593625498008 43 3 51.4 0 1 129 67 109 WP_235370031.1 helix-turn-helix domain-containing protein [Pseudoflavonifractor phocaeensis] diamond 255 79.7 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae Pseudoflavonifractor Pseudoflavonifractor phocaeensis
31083294 31083294 PRJNA1180292_P_NODE_11995_length_244_cov_0.912281_g11863_i0 PRJNA1180292 11995 244 0.912281 2.22596564 Clostridia bacterium 2044939 Bacteria Bacteria 60.8 1.57e-8   NR NCB74665.1 2044939 g11863 i0 42.4 0.811475409836066 66 38 81.1 0 225 28 212 277 NCB74665.1 hypothetical protein [Clostridia bacterium] diamond 198 60.8 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
31209176 31209176 PRJNA1180292_P_NODE_7935_length_253_cov_0.866667_g7803_i0 PRJNA1180292 7935 253 0.866667 2.19266751 Christensenellaceae bacterium 2054177 Bacteria Bacteria 112 1.1000000000000002e-28   NR MBS1481543.1 2054177 g7803 i0 63.9 0.984189723320158 83 29 97.2 1 246 1 138 220 MBS1481543.1 hypothetical protein [Christensenellaceae bacterium] diamond 249 112 1 Bacteria   Bacillati Bacillota Clostridia Christensenellales Christensenellaceae   Christensenellaceae bacterium
31304485 31304485 PRJNA1180292_P_NODE_11455_length_245_cov_0.906977_g11323_i0 PRJNA1180292 11455 245 0.906977 2.22209365 Veillonellaceae bacterium 2049049 Bacteria Bacteria 135 4.23e-36   NR NMC34106.1 2049049 g11323 i0 85 1.95918367346939 80 12 98 0 245 6 142 221 NMC34106.1 sodium:proton exchanger [Veillonellaceae bacterium] diamond 480 135 1 Bacteria   Bacillati Bacillota Negativicutes Veillonellales Veillonellaceae   Veillonellaceae bacterium
31494459 31494459 PRJNA1180292_P_NODE_4196_length_337_cov_1.651515_g4064_i0 PRJNA1180292 4196 337 1.651515 5.56560555 Bacilli bacterium 1903720 Bacteria Bacteria 43.9 0.041   NR MBP3765856.1 1903720 g4064 i0 28.2 0.916913946587537 103 64 82.8 2 294 16 40 142 MBP3765856.1 UvrD-helicase domain-containing protein [Bacilli bacterium] diamond 309 43.9 1 Bacteria   Bacillati Bacillota Bacilli       Bacilli bacterium
31545230 31545230 PRJNA1180292_P_NODE_8576_length_252_cov_0.871508_g8444_i0 PRJNA1180292 8576 252 0.871508 2.19620016 Candidatus Ventricola 2840601 Bacteria Bacteria 79.3 5.49e-15   NR MCI6588139.1 1898207 g8444 i0 84.4 1.07142857142857 45 7 53.6 0 137 3 1 45 MCI6588139.1 PolC-type DNA polymerase III [Clostridiales bacterium] diamond 270 79.3 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales     Clostridiales bacterium
31734712 31734712 PRJNA1180292_P_NODE_7977_length_253_cov_0.866667_g7845_i0 PRJNA1180292 7977 253 0.866667 2.19266751 root 1 Root_unresolved Root_unresolved 60.5 2.04e-8   NR WP_150357217.1 1485 g7845 i0 40.5 30.8537549407115 84 43 99.6 1 1 252 171 247 WP_150357217.1 MULTISPECIES: ribose-phosphate diphosphokinase [Clostridium] diamond 7806 60.5 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium  
32190358 32190358 PRJNA1180292_P_NODE_8598_length_252_cov_0.871508_g8466_i0 PRJNA1180292 8598 252 0.871508 2.19620016 Thermaerobacter sp. 1937527 Bacteria Bacteria 161 6.34e-44   NR MDA8204859.1 1937527 g8466 i0 94 0.988095238095238 83 5 98.8 0 2 250 180 262 MDA8204859.1 DEAD/DEAH box helicase family protein [Thermaerobacter sp.] diamond 249 161 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiales Family XVII. Incertae Sedis Thermaerobacter Thermaerobacter sp.
32209509 32209509 PRJNA1180292_P_NODE_7958_length_253_cov_0.866667_g7826_i0 PRJNA1180292 7958 253 0.866667 2.19266751 Bacillota 1239 Bacteria Bacteria 90.9 3.54e-19   NR MCD8198855.1 2049039 g7826 i0 62.2 6.34387351778656 74 26 87.7 1 249 28 202 273 MCD8198855.1 30S ribosomal protein S12 methylthiotransferase RimO [Phascolarctobacterium sp.] diamond 1605 91.7 0.991275899672846 Bacteria   Bacillati Bacillota Negativicutes Acidaminococcales Acidaminococcaceae Phascolarctobacterium Phascolarctobacterium sp.
32221956 32221956 PRJNA1180292_P_NODE_6418_length_278_cov_1.141463_g6286_i0 PRJNA1180292 6418 278 1.141463 3.17326714 Syntrophomonas zehnderi 404335 Bacteria Bacteria 43.5 0.0282   NR WP_046498750.1 404335 g6286 i0 40 0.755395683453237 70 36 75.5 1 259 50 127 190 WP_046498750.1 GTP 3',8-cyclase MoaA [Syntrophomonas zehnderi] diamond 210 43.5 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Syntrophomonadaceae Syntrophomonas Syntrophomonas zehnderi
32475230 32475230 PRJNA1180292_P_NODE_11499_length_245_cov_0.906977_g11367_i0 PRJNA1180292 11499 245 0.906977 2.22209365 Paenibacillus sp. 32O-W 1695218 Bacteria Bacteria 100 1.31e-22   NR WP_062493734.1 1695218 g11367 i0 63.5 1.81224489795918 74 27 90.6 0 225 4 1 74 WP_062493734.1 spore germination protein [Paenibacillus sp. 32O-W] diamond 444 100 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus sp. 32O-W

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;