contig_metadata
13 rows where analysis = "diamond", bioproject = "PRJNA1180292" and tax_clade = "delta/epsilon subdivisions"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13071450 | 13071450 | PRJNA1180292_P_NODE_10591_length_247_cov_0.896552_g10459_i0 | PRJNA1180292 | 10591 | 247 | 0.896552 | 2.21448344 | Olavius algarvensis Delta 4 endosymbiont | 260707 | Bacteria | Bacteria | 139 | 8.58e-39 | NR | CAD7844884.1 | 260707 | g10459 | i0 | 76.3 | 2.93927125506073 | 80 | 19 | 97.2 | 0 | 243 | 4 | 117 | 196 | CAD7844884.1 MAG: Aliphatic amidase AmiE (EC 3.5.1.4) [Olavius algarvensis Delta 4 endosymbiont] | diamond | 726 | 139 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Olavius algarvensis Delta 4 endosymbiont | ||||||
| 27735945 | 27735945 | PRJNA1180292_P_NODE_8764_length_251_cov_0.876404_g8632_i0 | PRJNA1180292 | 8764 | 251 | 0.876404 | 2.19977404 | Deltaproteobacteria bacterium RBG_13_61_14 | 1797834 | Bacteria | Bacteria | 87.8 | 4.51e-19 | NR | OGP60028.1 | 1797834 | g8632 | i0 | 51.8 | 0.99203187250996006 | 83 | 39 | 98 | 1 | 247 | 2 | 106 | 188 | OGP60028.1 MAG: hypothetical protein A2V67_08720 [Deltaproteobacteria bacterium RBG_13_61_14] | diamond | 249 | 87.8 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium RBG_13_61_14 | ||||||
| 28196632 | 28196632 | PRJNA1180292_P_NODE_9026_length_251_cov_0.876404_g8894_i0 | PRJNA1180292 | 9026 | 251 | 0.876404 | 2.19977404 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 52 | 7.91e-6 | NR | EFK06921.1 | 88274 | g8894 | i0 | 38.2 | 5.62948207171315 | 76 | 39 | 82.5 | 3 | 244 | 38 | 88 | 162 | EFK06921.1 conserved hypothetical protein [delta proteobacterium NaphS2] | diamond | 1413 | 52 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | delta proteobacterium NaphS2 | ||||||
| 28259732 | 28259732 | PRJNA1180292_P_NODE_12546_length_243_cov_0.917647_g12414_i0 | PRJNA1180292 | 12546 | 243 | 0.917647 | 2.22988221 | Myxococcota | 2818505 | Bacteria | Bacteria | 100 | 1.31e-22 | NR | PIU52434.1 | 1973972 | g12414 | i0 | 89.1 | 2.71604938271605 | 55 | 6 | 67.9 | 0 | 165 | 1 | 1 | 55 | PIU52434.1 MAG: ABC transporter permease, partial [Deltaproteobacteria bacterium CG07_land_8_20_14_0_80_60_11] | diamond | 660 | 100 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium CG07_land_8_20_14_0_80_60_11 | ||||||
| 28903625 | 28903625 | PRJNA1180292_P_NODE_8488_length_252_cov_0.871508_g8356_i0 | PRJNA1180292 | 8488 | 252 | 0.871508 | 2.19620016 | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-12 | 2013739 | Bacteria | Bacteria | 166 | 2.0599999999999994e-48 | NR | PKN68465.1 | 2013739 | g8356 | i0 | 97.6 | 0.988095238095238 | 83 | 2 | 98.8 | 0 | 250 | 2 | 76 | 158 | PKN68465.1 MAG: hypothetical protein CVU54_14855 [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-12] | diamond | 249 | 166 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-12 | ||||||
| 28967124 | 28967124 | PRJNA1180292_P_NODE_10668_length_247_cov_0.896552_g10536_i0 | PRJNA1180292 | 10668 | 247 | 0.896552 | 2.21448344 | Deltaproteobacteria bacterium RBG_13_53_1 | 2026735 | Bacteria | Bacteria | 101 | 2.9399999999999998e-24 | NR | OGP64406.1 | 1797831 | g10536 | i0 | 59.3 | 1.96761133603239 | 81 | 33 | 98.4 | 0 | 3 | 245 | 91 | 171 | OGP64406.1 MAG: hypothetical protein A2170_03735 [Deltaproteobacteria bacterium RBG_13_53_10] | diamond | 486 | 101 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium RBG_13_53_10 | ||||||
| 29554265 | 29554265 | PRJNA1180292_P_NODE_10750_length_247_cov_0.896552_g10618_i0 | PRJNA1180292 | 10750 | 247 | 0.896552 | 2.21448344 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 60.8 | 1.58e-8 | NR | PKN52403.1 | 2013740 | g10618 | i0 | 77.8 | 3.03643724696356 | 36 | 8 | 43.7 | 0 | 3 | 110 | 736 | 771 | PKN52403.1 MAG: hypothetical protein CVU55_07700 [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-13] | diamond | 750 | 61.2 | 0.993464052287582 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-13 | ||||||
| 30103656 | 30103656 | PRJNA1180292_P_NODE_10972_length_246_cov_0.901734_g10840_i0 | PRJNA1180292 | 10972 | 246 | 0.901734 | 2.21826564 | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-21 | 2013749 | Bacteria | Bacteria | 148 | 1.4200000000000001e-44 | NR | PKN29410.1 | 2013749 | g10840 | i0 | 88.8 | 1.96341463414634 | 80 | 9 | 97.6 | 0 | 6 | 245 | 1 | 80 | PKN29410.1 MAG: hypothetical protein CVU64_08295 [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-21] | diamond | 483 | 148 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-21 | ||||||
| 30388583 | 30388583 | PRJNA1180292_P_NODE_8173_length_253_cov_0.866667_g8041_i0 | PRJNA1180292 | 8173 | 253 | 0.866667 | 2.19266751 | Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15 | 1797895 | Bacteria | Bacteria | 140 | 2.4999999999999997e-36 | NR | OGQ89023.1 | 1797895 | g8041 | i0 | 85.2 | 0.960474308300395 | 81 | 12 | 96 | 0 | 6 | 248 | 1178 | 1258 | OGQ89023.1 MAG: hypothetical protein A2289_18585 [Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15] | diamond | 243 | 140 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15 | ||||||
| 31102264 | 31102264 | PRJNA1180292_P_NODE_11195_length_246_cov_0.901734_g11063_i0 | PRJNA1180292 | 11195 | 246 | 0.901734 | 2.21826564 | Thermodesulfobacteriota | 200940 | Bacteria | Bacteria | 151 | 1.89e-40 | NR | PKN62654.1 | 2013742 | g11063 | i0 | 95.1 | 2 | 82 | 4 | 100 | 0 | 1 | 246 | 269 | 350 | PKN62654.1 MAG: ATP-dependent RecD-like DNA helicase [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-15] | diamond | 492 | 151 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-15 | ||||||
| 32526188 | 32526188 | PRJNA1180292_P_NODE_13039_length_242_cov_0.923077_g12907_i0 | PRJNA1180292 | 13039 | 242 | 0.923077 | 2.23384634 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 104 | 1.05e-25 | NR | PKN51404.1 | 2013740 | g12907 | i0 | 61.3 | 5.93801652892562 | 80 | 31 | 99.2 | 0 | 3 | 242 | 129 | 208 | PKN51404.1 MAG: hypothetical protein CVU55_12275 [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-13] | diamond | 1437 | 105 | 0.990476190476191 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-13 | ||||||
| 32758886 | 32758886 | PRJNA1180292_P_NODE_9520_length_250_cov_0.881356_g9388_i0 | PRJNA1180292 | 9520 | 250 | 0.881356 | 2.20339 | Deltaproteobacteria bacterium SM23_61 | 1703399 | Bacteria | Bacteria | 117 | 6.49e-30 | NR | KPK86405.1 | 1703399 | g9388 | i0 | 87.5 | 0.768 | 64 | 8 | 76.8 | 0 | 2 | 193 | 252 | 315 | KPK86405.1 MAG: hypothetical protein AMJ94_18045 [Deltaproteobacteria bacterium SM23_61] | diamond | 192 | 117 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium SM23_61 | ||||||
| 32821832 | 32821832 | PRJNA1180292_P_NODE_12100_length_244_cov_0.912281_g11968_i0 | PRJNA1180292 | 12100 | 244 | 0.912281 | 2.22596564 | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-12 | 2013739 | Bacteria | Bacteria | 167 | 1.3099999999999998e-47 | NR | PKN70994.1 | 2013739 | g11968 | i0 | 97.5 | 0.995901639344262 | 81 | 2 | 99.6 | 0 | 2 | 244 | 101 | 181 | PKN70994.1 MAG: flavocytochrome c [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-12] | diamond | 243 | 167 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-12 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;