RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1174234" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1174234 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28588269 28588269 PRJNA1174234_P_NODE_35987_length_241_cov_0.857143_g35791_i0 PRJNA1174234 35987 241 0.857143 2.06571463 Vittaforma corneae ATCC 5 42399 Fungi Fungi 129 1.38e-36   NR XP_007604589.1 993615 g35791 i0 74.7 0.983402489626556 79 20 98.3 0 239 3 25 103 XP_007604589.1 uncharacterized protein VICG_01143 [Vittaforma corneae ATCC 50505] diamond 237 129 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
30230090 30230090 PRJNA1174234_P_NODE_14292_length_364_cov_1.158076_g14096_i0 PRJNA1174234 14292 364 1.158076 4.21539664 Enterocytozoon hepatopenaei 646526 Fungi Fungi 66.6 4.81e-11   NR OQS53416.1 646526 g14096 i0 36.8 1.74725274725275 106 66 87.4 1 362 45 23 127 OQS53416.1 transcription init factor, TAF9 [Enterocytozoon hepatopenaei] diamond 636 66.6 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;