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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA1174234" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1174234 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27293412 27293412 PRJNA1174234_P_NODE_28663_length_253_cov_1.283333_g28467_i0 PRJNA1174234 28663 253 1.283333 3.24683249 Chloroflexota bacterium 2026724 Bacteria Bacteria 45.8 0.00325   NR MYB77647.1 2026724 g28467 i0 42.9 1.6600790513834 70 37 79.4 2 37 237 70 139 MYB77647.1 delta(24(24(1)))-sterol reductase [Chloroflexota bacterium] diamond 420 45.8 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27861737 27861737 PRJNA1174234_P_NODE_35205_length_242_cov_0.911243_g35009_i0 PRJNA1174234 35205 242 0.911243 2.20520806 Chloroflexi bacterium RBG_13_66_1 1797637 Bacteria Bacteria 42.4 0.0486   NR OGO08765.1 1797637 g35009 i0 28 0.929752066115702 75 37 79.3 2 226 35 83 151 OGO08765.1 MAG: hypothetical protein A2Z66_07905 [Chloroflexi bacterium RBG_13_66_10] diamond 225 42.4 1 Bacteria   Bacillati Chloroflexota         Chloroflexi bacterium RBG_13_66_10
29503539 29503539 PRJNA1174234_P_NODE_12210_length_394_cov_1.411215_g12014_i0 PRJNA1174234 12210 394 1.411215 5.5601871 Caldilineales bacterium 2306055 Bacteria Bacteria 46.6 0.00218   NR MEZ4768260.1 2306055 g12014 i0 28.3 1.99492385786802 127 76 89.1 4 27 377 5 126 MEZ4768260.1 META domain-containing protein [Caldilineales bacterium] diamond 786 46.6 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales     Caldilineales bacterium
30470662 30470662 PRJNA1174234_P_NODE_5933_length_558_cov_1.550515_g5737_i0 PRJNA1174234 5933 558 1.550515 8.6518737 Bacteria 2 Bacteria Bacteria 166 3.62e-47   NR MBI5962342.1 2026724 g5737 i0 48.9 14.8655913978495 184 91 98.9 1 6 557 102 282 MBI5962342.1 DUF1295 domain-containing protein [Chloroflexota bacterium] diamond 8295 167 0.994011976047904 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31367975 31367975 PRJNA1174234_P_NODE_33156_length_245_cov_0.895349_g32960_i0 PRJNA1174234 33156 245 0.895349 2.19360505 Anaerolineae bacterium 2052143 Bacteria Bacteria 54.7 2.26e-6   NR MBN1810906.1 2052143 g32960 i0 39 5.3265306122449 77 41 89.4 2 25 243 56 130 MBN1810906.1 DUF4231 domain-containing protein [Anaerolineae bacterium] diamond 1305 54.7 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
31399558 31399558 PRJNA1174234_P_NODE_28616_length_253_cov_1.622222_g28420_i0 PRJNA1174234 28616 253 1.622222 4.10422166 Chloroflexota bacterium 2026724 Bacteria Bacteria 120 1.22e-30   NR MCA0452379.1 2026724 g28420 i0 79 0.960474308300395 81 17 96 0 252 10 260 340 MCA0452379.1 hypothetical protein [Chloroflexota bacterium] diamond 243 120 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31589355 31589355 PRJNA1174234_P_NODE_33536_length_244_cov_0.900585_g33340_i0 PRJNA1174234 33536 244 0.900585 2.1974274 Ktedonobacterales bacterium 2306968 Bacteria Bacteria 48.5 1.15e-4   NR HLV98750.1 2306968 g33340 i0 41.5 2.5327868852459 65 37 79.9 1 35 229 1 64 HLV98750.1 nuclear transport factor 2 family protein [Ktedonobacterales bacterium] diamond 618 48.5 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales     Ktedonobacterales bacterium
32019600 32019600 PRJNA1174234_P_NODE_27578_length_259_cov_1.548387_g27382_i0 PRJNA1174234 27578 259 1.548387 4.01032233 Bacteria 2 Bacteria Bacteria 60.1 2.6e-8   NR MBI9051985.1 2024896 g27382 i0 42.5 4.41312741312741 80 46 92.7 0 254 15 9 88 MBI9051985.1 DUF1295 domain-containing protein [Anaerolineaceae bacterium] diamond 1143 60.5 0.993388429752066 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium
32380217 32380217 PRJNA1174234_P_NODE_35879_length_241_cov_0.916667_g35683_i0 PRJNA1174234 35879 241 0.916667 2.20916747 Candidatus Limnocylindria bacterium 3047546 Bacteria Bacteria 148 6.26e-41   NR HYJ16406.1 3047546 g35683 i0 100 0.995850622406639 80 0 99.6 0 2 241 114 193 HYJ16406.1 molybdopterin cofactor-binding domain-containing protein [Candidatus Limnocylindria bacterium] diamond 240 148 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria       Candidatus Limnocylindria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;