RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA1174207" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA1174207 · 8 ✖

analysis 1

  • diamond · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11793924 11793924 PRJNA1174207_P_NODE_10850_length_458_cov_2.974026_g10324_i0 PRJNA1174207 10850 458 2.974026 13.62103908 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 150 7.939999999999998e-43   NR XP_004339224.1 1257118 g10324 i0 66.4 0.740174672489083 113 38 74 0 5 343 81 193 XP_004339224.1 ribosomal L15, putative [Acanthamoeba castellanii str. Neff] diamond 339 150 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24541609 24541609 PRJNA1174207_P_NODE_28220_length_272_cov_1.336683_g27691_i0 PRJNA1174207 28220 272 1.336683 3.63577776 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 112 1.24e-26   NR XP_004334949.1 1257118 g27691 i0 64.8 2.01838235294118 91 30 98.2 1 267 1 443 533 XP_004334949.1 uncharacterized protein ACA1_095960 [Acanthamoeba castellanii str. Neff] diamond 549 112 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26723467 26723467 PRJNA1174207_P_NODE_25541_length_283_cov_2.085714_g25012_i0 PRJNA1174207 25541 283 2.085714 5.90257062 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 47.8 0.0011   NR XP_004335119.1 1257118 g25012 i0 32.9 0.901060070671378 85 55 90.1 2 13 267 1145 1227 XP_004335119.1 leucine rich repeat-containing protein [Acanthamoeba castellanii str. Neff] diamond 255 47.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27008706 27008706 PRJNA1174207_P_NODE_37782_length_246_cov_0.890173_g37253_i0 PRJNA1174207 37782 246 0.890173 2.18982558 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 79 8.93e-17   NR XP_004338922.1 1257118 g37253 i0 53.1 1.5609756097561 64 30 78 0 246 55 33 96 XP_004338922.1 peroxisomal D3,D2enoyl-CoA isomerase [Acanthamoeba castellanii str. Neff] diamond 384 79 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30420010 30420010 PRJNA1174207_P_NODE_11853_length_432_cov_2.559889_g11326_i0 PRJNA1174207 11853 432 2.559889 11.05872048 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 108 4.15e-25   NR XP_004335426.1 1257118 g11326 i0 39.1 1.80555555555556 138 78 94.4 3 423 16 194 327 XP_004335426.1 cathepsin L, putative [Acanthamoeba castellanii str. Neff] diamond 780 108 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31399515 31399515 PRJNA1174207_P_NODE_40816_length_242_cov_0.911243_g40287_i0 PRJNA1174207 40816 242 0.911243 2.20520806 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 80.9 9.35e-17   NR XP_004340539.1 1257118 g40287 i0 59.7 0.830578512396694 67 27 83.1 0 2 202 127 193 XP_004340539.1 Ras GTPase rap1b, putative [Acanthamoeba castellanii str. Neff] diamond 201 80.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31778804 31778804 PRJNA1174207_P_NODE_28217_length_272_cov_1.366834_g27688_i0 PRJNA1174207 28217 272 1.366834 3.71778848 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 102 7.659999999999999e-23   NR XP_004341679.1 1257118 g27688 i0 56 10.7757352941176 91 37 97.1 1 7 270 432 522 XP_004341679.1 ATPase/histidine kinase/DNA gyrase B/HSP90 domain containing protein [Acanthamoeba castellanii str. Neff] diamond 2931 102 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32884607 32884607 PRJNA1174207_P_NODE_25620_length_283_cov_1.466667_g25091_i0 PRJNA1174207 25620 283 1.466667 4.15066761 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 89.7 1.82e-18   NR XP_004334239.1 1257118 g25091 i0 41.9 0.911660777385159 86 48 89 1 30 281 549 634 XP_004334239.1 MYC binding protein 2, putative [Acanthamoeba castellanii str. Neff] diamond 258 89.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;