RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1174207" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1174207 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27672546 27672546 PRJNA1174207_P_NODE_41724_length_241_cov_0.916667_g41195_i0 PRJNA1174207 41724 241 0.916667 2.20916747 Candidatus Saccharimonadia bacterium 2890869 Bacteria Bacteria 149 3.4599999999999993e-40   NR HSX83381.1 2890869 g41195 i0 88.8 1.99170124481328 80 9 99.6 0 2 241 86 165 HSX83381.1 iron ABC transporter permease [Candidatus Saccharimonadia bacterium] diamond 480 149 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia       Candidatus Saccharimonadia bacterium
32727369 32727369 PRJNA1174207_P_NODE_33180_length_251_cov_1.730337_g32651_i0 PRJNA1174207 33180 251 1.730337 4.34314587 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 103 1.5899999999999999e-24   NR MET1033121.1 2973664 g32651 i0 63.9 0.99203187250996006 83 30 99.2 0 1 249 150 232 MET1033121.1 glycosyltransferase family 2 protein [Candidatus Saccharimonadales bacterium] diamond 249 103 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;