RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1174207" and tax_phylum = "Bryozoa"

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tax_superkingdom 1

tax_phylum 1

  • Bryozoa · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1174207 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28019844 28019844 PRJNA1174207_P_NODE_34505_length_250_cov_0.870056_g33976_i0 PRJNA1174207 34505 250 0.870056 2.17514 Bugula neritina 10212 Bryozoa other_Eukaryota 53.1 5.65e-6   NR KAF6041547.1 10212 g33976 i0 37.7 24.912 69 35 82.8 1 208 2 67 127 KAF6041547.1 EIF2AK1 [Bugula neritina] diamond 6228 53.1 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Bugulidae Bugula Bugula neritina
28954762 28954762 PRJNA1174207_P_NODE_38268_length_245_cov_0.895349_g37739_i0 PRJNA1174207 38268 245 0.895349 2.19360505 root 1 Root_unresolved Root_unresolved 138 6.9e-37   NR ABW71257.1 231371 g37739 i0 85.9 40.2612244897959 78 11 95.5 0 234 1 86 163 ABW71257.1 mitochondrial ATP synthase beta subunit, partial [Alcyonidium diaphanum] diamond 9864 139 0.992805755395683 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Ctenostomatida Alcyonidiidae Alcyonidium Alcyonidium diaphanum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;