RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1167252" and tax_superkingdom = "Viruses"

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tax_phylum 2

tax_kingdom 2

tax_superkingdom 1

  • Viruses · 2 ✖

bioproject 1

  • PRJNA1167252 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28114224 28114224 PRJNA1167252_P_NODE_12705_length_347_cov_1.609489_g12432_i0 PRJNA1167252 12705 347 1.609489 5.58492683 Bodo saltans virus 2024608 Viruses Viruses 93.6 1.78e-19   NR YP_010778833.1 2024608 g12432 i0 72.4 3.00864553314121 58 16 50.1 0 346 173 532 589 YP_010778833.1 adenylosuccinate synthetase [Bodo saltans virus] diamond 1044 93.6 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Theiavirus Theiavirus salishense
30640665 30640665 PRJNA1167252_P_NODE_23453_length_252_cov_0.871508_g23180_i0 PRJNA1167252 23453 252 0.871508 2.19620016 uncultured Caudovirales phage 2100421 Viruses Viruses 67.4 6.58e-11   NR CAB4156763.1 2100421 g23180 i0 63.5 1.30952380952381 52 19 61.9 0 2 157 177 228 CAB4156763.1 hypothetical protein UFOVP658_145 [uncultured Caudovirales phage] diamond 330 67.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;